Asparagus officinalis (garden asparagus): 109836490
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Entry
109836490 CDS
T05243
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109836490
03036 Chromosome and associated proteins [BR:
aof03036
]
109836490
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109836490
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109836490
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109836490
microRNA pathway
RISC loading complex
109836490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
109836490
NCBI-ProteinID:
XP_020259992
LinkDB
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Position
1:81153446..81157546
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AA seq
526 aa
AA seq
DB search
SVAGKEISNAIVAPSPPVSSKGVVFCRRPGFGQIGTRCLVKANHFLAQLPDKDLNQYDVT
IIPEVRSRSVNRAIIGELVRVYRESELGMRLPAYDGRKSLYTAGSLPFSSKEFVVKLTEE
DDGMVAREKEYRVVIKFAARADLHHLRRFMEGKQADAPQDAVQVLDIVLRELSNQRYLSI
GRSFYSPDIRKPQRLGDGLQSWCGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQV
LGKDVSLRTMSDADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSLPTRELIFPVDEQN
NMKSVVEYFKEMYGFTIQYSHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITS
LLKVTCQRPREQEMDILQTVHQNSYDQDPYAKEFGISISDKLASVEARVLPAPWLKYHET
GKEKECLPQVGQWNMMNKKVINGCTVNHWACINFSRSIQESTAHGFCQELAQMCQITGMV
KFSTQMENLTFSCFSFLVLMKTTEATVRDVLERLQLFDPTMDSTHQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
tctgttgccggtaaagagataagcaatgcaattgtggcaccctcaccgccagtgtcgagc
aagggagtcgtgttttgtcgccggcctgggtttggccagattggaactagatgtcttgtg
aaagctaaccatttccttgcccagttgcctgacaaggacctgaatcagtatgatgtgacg
attatacctgaggttcgctcgaggagcgtgaatagagctataattggtgagctggttagg
gtttatagagagagcgagctagggatgaggctgcctgcttatgatgggaggaagagtctt
tacactgctgggtctctgccttttagctcgaaggagttcgttgtgaagctcacggaggag
gatgatggaatggtcgcgagggagaaagaataccgggtggttatcaagtttgctgctcgc
gctgatcttcatcacttgcgtcggtttatggaagggaagcaggctgatgcgccacaagat
gctgttcaggttcttgatatagtgctgagggagttgtcgaatcagaggtatctttcaatt
gggcggtctttctattctcctgatattaggaaaccacagaggctgggtgatgggttgcag
tcatggtgtggattctatcagagcattagaccgactcagatgggtctttcgctgaatatt
gatatgtcgtctacagcattcatagaacccctgcctgtgatcgagtttgtagctcaagtt
ttgggcaaagatgtgtccttaaggacgatgtctgatgctgatcgtgttaagatcaagaag
gctcttagaggtgtaaaagttgaagtcactcatagaggaagcgtacgaaggaaatatcga
gtttcaggattgacatctcttcctactagagagctgattttcccagttgacgaacaaaac
aacatgaaatctgtggttgaatacttcaaagaaatgtatggctttacaattcaatattct
cacctgccttgccttcaagtaggaaatcaaaagaaggcaaattatctgccaatggaggca
tgtaaaatagttgaaggacagagatatacaaagagattgaatgaaaagcaaattacttcc
ctgctaaaagttacctgccagaggcccagagaacaggagatggatatactgcagacagtt
catcaaaatagttatgaccaagatccttatgcaaaggaatttggaatcagcatcagcgac
aaacttgcctccgtcgaagctcgagttcttccagctccttggttaaaatatcatgaaact
ggaaaagaaaaggagtgtttgcctcaggttggacaatggaatatgatgaacaagaaagta
ataaatggttgcactgtaaaccactgggcttgcatcaacttttcacgtagcattcaagaa
agcactgctcatggattctgtcaagagctagctcagatgtgccaaataactggcatggta
aaattttctacccaaatggagaatttgactttctcatgttttagtttccttgtactgatg
aaaactactgaggcaacagttagggatgttcttgaaagactgcagttgtttgatccaaca
atggacagcacgcatcaatag
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