Asparagus officinalis (garden asparagus): 109836584
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Entry
109836584 CDS
T05243
Name
(RefSeq) DNA polymerase delta small subunit
KO
K02328
DNA polymerase delta subunit 2
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03030
DNA replication
aof03410
Base excision repair
aof03420
Nucleotide excision repair
aof03430
Mismatch repair
aof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109836584
03410 Base excision repair
109836584
03420 Nucleotide excision repair
109836584
03430 Mismatch repair
109836584
03440 Homologous recombination
109836584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aof03032
]
109836584
03400 DNA repair and recombination proteins [BR:
aof03400
]
109836584
DNA replication proteins [BR:
aof03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109836584
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109836584
MMR (mismatch excision repair)
DNA polymerase delta complex
109836584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
DPOA2_OB
Motif
Other DBs
NCBI-GeneID:
109836584
NCBI-ProteinID:
XP_020260121
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All DBs
Position
4:complement(10194484..10213731)
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AA seq
445 aa
AA seq
DB search
MGEDTEMREGDPNLLERKQATYRSLDERYEIHGERYKGQQYSQIYFTRLHHMRNLLSSVT
PKWKPHVPVNTVLELEAGKECIIIGTIYKHMKLKPCVLDEYSKERSVVPLVRPHNFMHPD
DYLVLEDDSGRVKLTGELVSPSTFVTGIVLALHGKETGGGEFLVQDILEAGLPPQIERPH
DSREDKYVVFVSGLNVGSDTFNPLQFQLLVDHVTGHLGDENEQEIASQIVRLVIAGNSVE
ISQCLLTGQNIASKDHAKLSEPIKELDILLTQLAAAMPVDIMPGSNDPANFSLPQQPLHR
CLFPGASVYNTFLSCTNPHEFELDGARFLGTSGQNIEDLDKYSDAKSKLEFMERTLRWRH
LAPTAPNTLGCYPYTDKDPFLLESCPHVYFVGNQHKYETSVLQGPDKQLVRLISIPRFCE
TGVAIMLNLRSFECHVLSFSTNLDS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagacacagagatgagagaaggcgaccccaatctcctcgagaggaagcaagcg
acctatcgatccttagatgagaggtacgagatccatggagaaaggtacaaggggcagcag
tacagccaaatctacttcactcgccttcatcacatgaggaatctcctcagctcggtcacc
cccaaatggaaacctcatgttccagtgaatacagttttggagcttgaagcaggcaaagaa
tgcataatcattggaactatctacaagcatatgaagctcaagccttgtgttcttgatgaa
tattctaaggagagatctgtggttccgcttgtcagacctcataatttcatgcatcctgat
gattatcttgtcttagaagatgatagcggaagagttaaactgactggagagctggtcagc
ccttcaacttttgtaacaggcattgtactggcgctccatggaaaggaaacaggtggtggt
gaatttcttgttcaagatattcttgaagctggtcttcccccacaaattgagcgaccacat
gattcaagagaagacaagtatgtggtctttgtttcaggcttgaatgtcgggagcgacacc
ttcaatcctctacagttccagcttcttgtggatcatgtaactgggcatttgggggatgaa
aacgaacaagagattgcatctcaaatagttcgccttgtaattgctggaaattctgtagaa
atttcacaatgcttacttactggccagaatatagcttcaaaggaccatgccaaactctca
gaaccaatcaaagaactagatatcctattaactcagcttgctgctgctatgcctgtggac
atcatgccaggatctaatgacccagcaaatttctccttacctcaacagcctttgcatagg
tgcctttttccaggagcatctgtttataacacattcttgtcctgtacaaatcctcatgaa
tttgagcttgatggcgctcggttccttggcacgtctggtcagaacatagaagatctagac
aaatattctgatgcaaaaagtaagcttgaatttatggagaggacgttaagatggaggcac
ctagcaccaactgctccaaacacccttgggtgctatccatatactgacaaggaccctttc
ctccttgagagctgtccacatgtttacttcgttggcaatcagcataaatatgagacctct
gtattacaaggacctgataagcaattggtgaggcttatctctattccaagattttgtgag
actggagttgctatcatgctaaatttgaggagttttgaatgccatgttctcagcttctca
acaaacttggatagctaa
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