Asparagus officinalis (garden asparagus): 109836650
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Entry
109836650 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 1A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109836650
03036 Chromosome and associated proteins [BR:
aof03036
]
109836650
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109836650
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109836650
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109836650
microRNA pathway
RISC loading complex
109836650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
109836650
NCBI-ProteinID:
XP_020260210
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All DBs
Position
4:complement(12578677..12597507)
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AA seq
1144 aa
AA seq
DB search
MAFGVVQQTQQHQAVAMVRKRRTERMNLPTSGEGSGSQESSGSGGQGGGPQHPAGRTAVP
QQQGGGGGRGGGFVNPQPPQHGGRGGGDYQGRGAGSQPRGGMAPQEGGILPEYQGRGSVQ
PRGGMAPQVPHPEYQGRGAPQPHRGGMVQQQPGTQQYEYRGRGGSQARGGMPHQYAGGRR
GGGHTGGQRTGPSGSPTRPPAPELHQATQATYHASQPSPTAEAGSSQSQTPEITFGQVEQ
QFQQLSVQGEDKPTQAIQTVTSASSSKSVRFPLRPGMGSSGDKCIVKANHFFAELPDKDL
HQYDVSITPEVTSRGVNRAVIKQLVTLYRQTHLGGRLPAYDGRKSLYTAGPLPFGSKSFQ
ITLLDEEEGPAGQRRERLFTVAIKFASRADLHHLELFLAGRQADAPQEALQVLDIVLREL
PTARYTPVGRSFYSGDLGRRQSLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLP
VTDFVAQLLNRDVSNRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQTTREL
TFPVDDRGTVKSVVQYFLETYGFTIQQINWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKR
LNEKQITALLKVTCQRPSDREQDILRTVSHNNYNNDPYAQEFGIKISERLASVEARILPP
PWLKYHDTGKERNCLPRVGQWNMMNKKMVNGGRVSNWACINFARNVHDNIAHGFCKDLAL
MCRTSGMDFSLEPLLPVLTARPDQVDKALKARYSDSMKILKPQGRELDLLIVILPDNNGS
LYGDLKRICETDLGLVSQCCLTKHVFKISKQYLANVALKINVKVGGRNTVLVDALSRRIP
LVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLF
KVWQDPQRGSVSGGMIRELLMSFRRASGQKPERIIFYRDGVSEGQFYQVLLYELDAIRKA
CASLESDYQPPVTFVVVQKRHHTRLFANNYRDQSSVDRSGNILPGTVVDSKICHPTEFDF
FLCSHAGIQGTSRPAHYHVLWDENKFTADALQSLTNNLCYTYARCTRSVSIVPPAYYAHL
AAFRARFYMEPETSDSGSMASGAVTGXGRGAAAGGARATRGPGGTVVRPLPALKENVKRV
MFYC
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggcttttggggttgtgcaacaaacccaacaacaccaagctgttgccatggtgaggaaa
aggagaacggagagaatgaaccttcctacttctggagaggggtctgggtctcaggagtcc
agtggcagtggtggacaaggtggaggaccacagcatccagctggcagaactgcagtgcct
caacaacaaggtggtgggggaggacgtggtgggggctttgtcaatcctcagccaccgcaa
catggtggacgtggcggcggagactaccaaggtcgaggtgcaggatcccaaccacgtgga
ggaatggcaccacaggagggtggtattcttcctgaataccaaggtcgtggaagtgttcaa
cctcgtggaggcatggcaccccaggtccctcatccagaataccaaggtcgtggtgctcct
cagcctcacagaggtggcatggtacagcagcagcctggcacccaacagtatgagtatcga
gggcgtggcgggtctcaagcgagaggtgggatgcctcatcaatatgctggtgggcgacgg
ggtggcggacacactggtgggcaacggaccggcccttctggtagtccaaccaggccgcca
gctcccgagctgcaccaagcaacacaggctacttatcatgcctctcagccttctccaaca
gcagaagctggctcatcacaatcccaaaccccagagataacttttggtcaggtagagcag
cagtttcagcagctctctgtccagggtgaagataaacctacccaggcaatccagactgtt
acatctgcttcatcaagcaaatctgtgaggtttccgttacgtccaggaatgggtagttct
ggtgataaatgcatagtaaaggctaaccatttctttgctgagcttcctgataaagatctt
caccagtatgatgtttcaataacaccagaggttacgtcccgaggtgtgaatcgagctgtc
ataaagcagcttgtcactctctacagacagactcatttaggtggtcgccttccagcttat
gatggcagaaagagcctttatacagctggaccactaccatttgggtcgaaaagctttcaa
attactctgcttgatgaagaagaaggaccagctggccaaaggagagagaggctgttcaca
gttgcaattaaatttgcttctcgtgctgatcttcatcacttggagttgttcttagcaggg
aggcaagcagatgctccccaagaagcactgcaagtgcttgacatcgtgcttagggagttg
cctacagcaagatatacaccagttggtcgatcattttactcgggtgatcttggaagaaga
caatcattgggtgagggcctggaaagttggcgaggtttttaccagagtatccgtccaaca
cagatgggattgtcactaaatattgacatgtcatccactgctttcatagagccactgcca
gttaccgattttgttgctcagcttttgaacagagatgtctccaacagaccgttgtctgat
gctgatcgcgtgaagataaaaaaggctcttagaggtgtcaaagttgaggtcacgcatcgt
gggaatatgcgtaggaagtatcgcatatctggcttaacatcacagacaacaagagagctg
acattccctgttgatgatcgtggcacggtgaagtctgttgttcagtactttctagagact
tatggttttaccattcaacaaataaattggccttgcctgcaagttggaaatacgcaaaga
ccaaattacctgccaatggaggtttgtaaaattgtcgaaggccaaaggtactcaaagagg
ttaaatgagaaacagataactgcccttctgaaagtgacatgccagcgaccttctgatcga
gagcaagacattctgcggactgttagtcataataactacaacaatgatccctatgcacaa
gaatttggaatcaagatcagtgaaagactcgcttcagttgaggcaaggattttgccgcct
ccttggttgaaataccacgacactggtaaggagaggaattgtttgccaagagtgggccag
tggaatatgatgaacaagaaaatggtaaacggtgggagagtaagtaactgggcatgcatc
aattttgcaagaaatgttcatgacaacattgctcacggattctgtaaagacctggccctg
atgtgtcggacttctggaatggatttttctttggagcctttgcttcctgtactaactgct
aggcccgatcaagtggataaggctctaaaagcacgttacagtgactcaatgaaaatactc
aaacctcagggcagagaactcgacctgctgattgttatattacctgataacaatgggtct
ctttacggggatcttaaacggatttgtgagacggatcttggattagtatcacagtgctgt
ttgacaaagcatgtttttaagataagcaaacaatatcttgcaaatgttgctctcaagatc
aatgtcaaggttggagggagaaatacagttcttgtggatgctttatcaaggcgcattcct
ctagtcagtgacagacctacaattatatttggtgctgatgtaacacatcctcatcccggc
gaagattctagtccttccattgcagctgttgttgcgtcccaagattggcctgaggttaca
aagtatgctggattggtttgtgcacaggcccatcgtcaggagctgatacaagatttattt
aaagtttggcaggatcctcagagaggatctgtcagtgggggcatgatcagggagcttctc
atgtccttcagaagagcaagtgggcagaagcctgagcgaattatcttttacagggatggt
gtcagtgagggccaattttatcaagtactgttgtacgagcttgatgcaattcggaaggct
tgtgcttcactagagtctgattatcagcctcccgtgacatttgtggtggtgcaaaagcgt
catcatacccgtctgtttgccaataactatagagaccaatcatctgtggacagaagtgga
aatatactgcctggtaccgtagtcgactccaagatttgccatccgacggagtttgacttt
ttcctatgtagtcatgcaggcattcagggtacaagtcgtcctgcccattaccatgtcttg
tgggatgagaacaaattcactgctgatgccctgcaatctcttacaaacaacctatgttac
acttatgctagatgcacacgatctgtatcaatagtacctcctgcatattatgcccatttg
gctgcattccgagctcggttttatatggagccagagacgtctgacagtggatcgatggcc
agcggtgcagttactggcnctggccgtggagctgctgctggaggtgcccgtgctacccgg
ggtcctggtggtactgtagttaggccccttcctgccctcaaggaaaatgttaagagggtt
atgttctactgttaa
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