Asparagus officinalis (garden asparagus): 109836781
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Entry
109836781 CDS
T05243
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109836781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109836781
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109836781
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
109836781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Prok-RING_4
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
109836781
NCBI-ProteinID:
XP_020260373
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All DBs
Position
4:complement(17764617..17771114)
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AA seq
319 aa
AA seq
DB search
MQRGVPVMYFGKKQNFTSSSAERMDEAPSFSGDSCDTSVIKGQKAQLSKAPSNSKNPTIL
PNSDIDGLLECPVCSNSMFPPIQQCPSGHTLCSACKNRVNNKCPICRKEIGNIRCLALEK
LAVSLHLPCSYQCLGCEEMFPYYSKLQHEEQCIYRPYECPHPGSDCPFTGDIQSLLSHLR
ENHKVDLQNGCTFNHRYVKQDPCSVDNVSWTLTLFNCFGQYFCLHFEAFLLGSEPVYMAF
LRFMGEESEARKFGYCLEVGGNGRKLMWHGVPRSIRTHHRIVRDSHDGLIVQRSMALYFS
GGDRKELKLRVTGRIWREA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgaggtgtccctgtcatgtattttggaaagaaacagaattttacctcatcttct
gctgagaggatggatgaagcaccctcattctctggggactcttgtgacacgtctgtcatc
aaaggtcagaaggctcaattgtctaaagcaccctcaaattcaaaaaatcctactattctt
cccaatagtgatatagatgggctcttggagtgtcctgtctgcagtaattcaatgtttcca
cctatacaacagtgtcccagtggtcataccctatgttcagcctgtaagaacagagttaac
aacaagtgcccaatttgtcgaaaggaaattggcaacataagatgcctggcacttgagaag
cttgcagtttcgctccacttgccttgttcttatcagtgccttggttgtgaggagatgttt
ccttattatagcaagctgcagcacgaagaacaatgtatctataggccatatgagtgccct
catcctggttcagattgccccttcactggggacatccagtctcttttgtcacatctgaga
gaaaatcacaaggtggaccttcaaaatggctgcacatttaatcatcgttatgtgaaacaa
gacccatgctcagtcgataatgtttcatggacactaacacttttcaattgcttcggccag
tacttctgcctacacttcgaagccttcctcctaggatctgaaccagtgtacatggctttc
cttcgtttcatgggcgaagaatccgaggcaaggaagtttggttactgtctcgaggttggt
ggtaacgggcggaagctgatgtggcatggtgtacctcgcagcatcaggacccatcataga
attgtccgtgatagccatgacggtctcatagttcagaggagcatggctctctacttctct
ggtggagatcggaaggaattgaagctgagagttactggcagaatatggagggaagcgtaa
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