Asparagus officinalis (garden asparagus): 109836789
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Entry
109836789 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin 1-like
KO
K17917
sorting nexin-1/2
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109836789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109836789
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aof04990
]
109836789
Membrane trafficking [BR:
aof04131
]
Endocytosis
Macropinocytosis
Sorting nexins
109836789
Domain-containing proteins not elsewhere classified [BR:
aof04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109836789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
CCM2_C
TGT
Motif
Other DBs
NCBI-GeneID:
109836789
NCBI-ProteinID:
XP_020260386
LinkDB
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Position
4:complement(17909798..17920357)
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AA seq
407 aa
AA seq
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MISTEPSTSASSSSSSSSSQSPRSPSXPFLSVTVTDPVKLGNGVQAYTSYRVISKTNLPE
YQGQEKIVIRRYSDFVWLHDRLAEKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRQALDIF
VNRIASHPELKQSEDLRIFLQEDEETMERARSQEAGLFKKKHSDFMQIFKDVQSKVSDVV
LGKEKPIEESNPEYEKLKNYIFELEIHLSEAQKQAFRLVKRHRELGQSLSDFGKAIKLLG
SSDGNSLGKVISEFGSKSESLSLKLYKEAHDLLMNFEEPLKDYVRAVQSIKATMADRANA
FKQQYDLVEATKLKEINFDKLMLIQSEKAAEAEIEYKELKSESVEATQKYETIVKLMSEE
IVRFQEQKTADMGLAFHEFSKGQERLKDVANAWRSLLPKLETCSPSS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatctctacggagccgagtacgtcggcttcttcttcttcttcttcttcttcttctcag
agccctagatctccgtctnngccgtttctatcggttacggtcaccgacccggtgaagtta
gggaatggagttcaagcctacacctcgtatcgcgtcatcagcaagacaaatttacctgaa
tatcaagggcaagaaaagattgttattcgccgttacagtgactttgtttggttgcacgac
aggcttgctgaaaaatacaaaggaatcttcattcctcctctacctgagaagagcgctgta
gagaagttcagattcagtgcagaatttattgaaatgagacgtcaggcactggacatattt
gtaaatcgaatagcttctcaccctgaacttaagcaaagtgaggatttaaggatcttttta
caggaagatgaagagacaatggaaagagcacgatctcaagaagctggactgttcaagaaa
aaacattcagattttatgcaaatatttaaggatgtgcagtctaaggttagtgatgttgtt
ttgggaaaggaaaagcctattgaggagtcaaatcctgaatatgagaagctaaagaactat
atttttgagcttgaaattcacttgtcagaggcacagaaacaggcatttcgccttgtaaag
agacatagggagctgggtcagtcgctgtcagattttggtaaggcaatcaaacttttgggc
tctagtgacggaaattctcttgggaaggtgatctctgagtttggttcaaaatcagaatcg
ttatctttgaagctatacaaggaggctcatgaccttctaatgaactttgaagaaccctta
aaagattatgtgcgagcagtgcagtctatcaaggccacgatggcggacagagccaatgct
ttcaaacagcagtacgatttagttgaagcaaccaagttgaaggagattaattttgacaag
ctgatgttaatacaatctgaaaaggctgcagaagcagagattgaatacaaagagttgaag
tcggaaagtgtggaggccacccaaaaatatgaaactattgtgaagttgatgagtgaagaa
atagttcggttccaagaacaaaagaccgctgacatgggacttgccttccacgagttctca
aagggacaagagaggcttaaggatgtagccaatgcatggcgaagtcttctaccaaagctt
gaaacttgttcaccttcctcataa
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