Asparagus officinalis (garden asparagus): 109836922
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Entry
109836922 CDS
T05243
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109836922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109836922
03110 Chaperones and folding catalysts [BR:
aof03110
]
109836922
03029 Mitochondrial biogenesis [BR:
aof03029
]
109836922
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aof04147
]
109836922
Enzymes [BR:
aof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109836922
Messenger RNA biogenesis [BR:
aof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109836922
Chaperones and folding catalysts [BR:
aof03110
]
Heat shock proteins
HSP60 / Chaperonin
109836922
Mitochondrial biogenesis [BR:
aof03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109836922
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109836922
Exosomal proteins of other body fluids (saliva and urine)
109836922
Exosomal proteins of breast cancer cells
109836922
Exosomal proteins of colorectal cancer cells
109836922
Exosomal proteins of bladder cancer cells
109836922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
109836922
NCBI-ProteinID:
XP_020260556
LinkDB
All DBs
Position
4:22571713..22589243
Genome browser
AA seq
608 aa
AA seq
DB search
MASTCSTISFAASSGLAAEKKLSALTGRPSQLSSFASISSSSLSSRRQNFRLQKRCNSQI
RAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQIT
RGIEKTAKGLVAELKLISKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLE
EGKSAENNLYVVEGMQFDRGYLSPYFVTDSEKMSVEYENCKLLLVDKKITNARDLINVLE
DAIRGGYPILIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGG
TVIRDEVGLTLEKADKEVLGTAAKVVLTKDSTTIVGDGSTQEEVAKRVGQIRNLIEAAEQ
EYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
LLRLASKVDAIKETLENDEQKVGADIVKRALIYPLKLIAKNAGVNGSVVTEKVLSNDNPK
YGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVDIKEPEPIPAGNP
MDNSGYGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacttgcagtactatttcttttgctgcctctagcggccttgcagctgaaaag
aagctctcagcccttacagggaggccgtcccagctatcttcttttgcctcgatttcttct
agttctttaagtagcaggaggcagaacttccgtctacagaaacgatgcaactctcagatc
agggcaatggcgaaagagctatattttaataaggatgggtcagctattaagaagctgcaa
accggtgttaacaagcttgcagatcttgttggggttactttaggtccaaaaggcagaaat
gttgttcttgaaagtaaatatgggtccccaaagattgttaatgatggtgtcacagtggct
aaagaggtcgagttggaggacccagtggagaacattggtgccaagttggtaagacaagca
gctgcaaagaccaatgacttggctggcgatgggaccacaacttcagttgtccttgctcaa
ggtctaattgctgaaggtgtcaaggtggttgcagctggtgccaaccctgttcaaattacc
cgaggtatagagaaaacagctaaaggcttagttgctgaactcaagctcatttcaaaggag
gttgaagacagtgagctcgcagatgtagctgcagttagtgctggaaacaactatgagatc
ggaaacatgatagctgaggctatgagtaaggttggtaggaaaggtgtagtgacgctcgag
gagggtaaaagtgcagaaaacaacctctatgttgtagagggaatgcaatttgatcgtgga
tatttgtccccctacttcgtaactgacagtgaaaagatgtcagttgaatatgagaactgc
aagttgcttcttgttgacaagaaaattacaaatgcaagagatctgatcaacgtgttggaa
gacgccataaggggtggatatccgatcttgataattgctgaagatattgaacaggaagct
cttgccacccttgtcgtaaataaattaagggggtccctcaagatcgctgcgcttaaagct
cctggatttggggagcgcaaaagtcaatatcttgatgacatagcaatattgactggagga
actgtaatcagagatgaagttggactgacattggaaaaggctgacaaagaggtcttgggt
actgcagctaaagttgtgctaactaaagattcaaccaccatagttggtgatggaagcacc
caagaagaagtagctaaaagagttggacagatccgaaatttgatagaggctgctgaacaa
gaatatgaaagagaaaaactaaatgagagaatagcaaaactttctggtggtgttgctgtt
attcaggttggagcacaaacagagactgaattaaaagagaagaagctgagagtggaagat
gcattgaatgctactaaggctgctgttgaggagggtattgttgttggtggtggatgtaca
cttctgaggcttgcatctaaggttgacgccatcaaggaaactctagaaaatgatgagcaa
aaggtaggagcagatattgtcaaaagggcattgatctatccattgaaattgattgccaag
aatgctggagttaatggaagtgttgtcactgagaaggtgctttctaatgacaaccccaaa
tatggttataatgctgccactggaaagtatgaggacttgatggctgctgggataattgat
cccacaaaggtggtaagatgttgcttggagcatgctgcgtcagttgcgaaaacgttctta
acatcagatgttgtggtggttgatatcaaggagcctgagcctatacctgcagggaatcca
atggacaactcaggctatggctactag
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