Asparagus officinalis (garden asparagus): 109837013
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Entry
109837013 CDS
T05243
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109837013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109837013
03036 Chromosome and associated proteins [BR:
aof03036
]
109837013
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
109837013
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
109837013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_RIG_1st
RMC1_N
WD40_RFWD3
Pep3_Vps18
Beta-prop_SCAP
CFAP43_N
WDR54
YajC
Motif
Other DBs
NCBI-GeneID:
109837013
NCBI-ProteinID:
XP_020260680
LinkDB
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Position
4:25950478..25953909
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AA seq
480 aa
AA seq
DB search
MDAGSYTSVSSEKMRSRMRSRAPLREVGSTVFIPPLRSSSLSNPLSRQSSADRFIPDRSA
MDFDYALYALTESRKEKENSSSATASPSKEAYRKLLAETLLNNRTRILAFKSKPPTPTDG
FLSGSTSDPLTSSSHLTKPKQRRYISQTAERTLDAPDLVDDYYLNLLDWGSSNVLSIALG
NTVYLWNASNGSTSELVTIDEDVGPVTSVSWAPDGQHIAVGLNNSHIQLWDSTNSRLLRT
LKGVHRSRVGSLAWNNNILTTGGMDGKIVNNDVRIRSHAIQTYRGHTQEVCGLKWSGSGQ
QLASGGNDNLLHIWDLSMSSSTPPPNQNQYVHRFEDHMAAVKALAWCPFQSNLLASGGGG
SDRCIKFWNTHTGACLNSIDTGSQVCSLLWNKNERELLSSHGFTQNQLTLWKYPSMVKMA
ELTGHTSRVLFMAQSPDGCTVASAAGDETLRFWNVFGTPEVAKPVPKGNSVPFSSYNHIR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaggatcttacacatctgtctcctctgagaagatgaggtcgagaatgagatct
cgggccccgcttcgagaagtcggatccactgttttcatccctcctcttcgatcctcctct
ctttcgaatccgctgtcgagacagagcagtgctgacagattcataccagatcgatctgct
atggacttcgactacgccctctacgctctaacagaatcaagaaaagaaaaggaaaacagc
tcatcagcaactgcatccccgtccaaagaagcctacagaaaactcctagccgagaccctc
ctcaacaaccgaacccgaatcctagccttcaagagcaaacccccaacccctactgatggc
ttcttatcgggctcaacatctgacccgttaacctcctcctctcacctaaccaaaccgaaa
caaagaagatacatttctcagactgcagagaggacattggatgctcctgatcttgttgat
gattattaccttaatcttcttgattggggaagtagcaatgtgctctcgattgcacttgga
aatactgtgtatttgtggaatgcttcgaatggatcgacatctgagcttgtgacaattgat
gaggatgttggtcctgtgactagtgttagctgggctcctgatggccagcatattgctgtg
gggcttaataattctcatattcagttgtgggattcgacaaacagtcgactgctaagaaca
ttgaaaggagtccacagatctcgggttggctctctcgcctggaacaacaacatcctaaca
accggaggaatggatggaaaaatcgtaaacaacgatgtcagaatccgatcacacgccatc
caaacttaccgaggacacacccaggaagtctgcggccttaaatggtcaggctcaggccag
caactcgccagcggaggcaatgacaacctcctccacatctgggacctctcaatgtcatcc
tcaaccccacctccaaaccaaaaccaatatgttcatcgcttcgaagatcacatggcagcg
gtcaaagccctagcttggtgcccatttcaaagcaacttactagcttcaggtggaggtgga
agtgatcgatgcataaaattttggaacactcacactggggcttgtttgaattcgattgat
actgggtcacaggtttgctcgctgctttggaataaaaatgagagggaattgttgagctcc
catgggtttactcagaatcaattgacgctttggaagtatccttcgatggttaagatggca
gagttgactgggcatacttccagggttttgtttatggctcagagtcctgatggatgcact
gtcgcgtcggctgctggagatgagacattgagattttggaatgtttttggaactcctgaa
gttgcgaagcctgtgcctaaggggaactcagtgccctttagtagttataatcatattagg
taa
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