Asparagus officinalis (garden asparagus): 109837167
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Entry
109837167 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin
KO
K23288
syndetin
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109837167
Membrane trafficking [BR:
aof04131
]
Protein recycling
Others
EARP complex
109837167
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
109837167
NCBI-ProteinID:
XP_020260883
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Position
4:complement(34920811..34947766)
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AA seq
1138 aa
AA seq
DB search
MRRDPSGLPSFSGGGGGSGGDGRSIDDFEVSPGPLLFLPLLLLQGGGMDLTRVGEKILSS
VRSARSLGLLPAPLASDRPEVPARAAAAAAVARALAGMPPHQRLALPSNSEEMVSIYGTR
SQDHVIEELEENFYEEDFDPVKYILENIPSEEADAFYFEEKATLRLLQLDRITERLSRHV
MEHHEEMVKGMQLVMELEQDLKVANVICRNGRRHISSSMHEVSRDLVVHSNSKKKQALLD
ILPILTDLHHAVDMQMELETLVQEGNYFRAFQLLPEYLQVLESYSELSAVQEMGRGIEAW
LTRTLQKLDSLLLGVCQMFNKESYVTAVDAYALVGDVAGLAEKIQSFFMQEVLSETHSVL
KDIVQEEIGNNAQRNRLTYSDLCSLIPESKFRQCLLNTLDALFRLMCSYYAIMSFQPEER
GSEYQISNIELSSSNGSQCGGDGLLSDSGVSRDPGDLFEPVIEVKGLSPEENADASCASL
GGDITGHGSTSPSTSSVSVDDVHISLSSSESPFYQLRKDAAAFVSQTLERGRRNLWQLIT
SRVSVLLSCSAVSSSSTFQFLKNYEDLNIFILAGEAFCGLEATEFRRRLRSVSENYMAAF
HKQNVYALKMVLEKESWVKISGDTHQVISLAGLIGDGAPLIVSSATNTSTLSLLRSKKIS
EKVDTGRQNNGFSYWLRISNPFSSKLTSGSYESLNAQILVNGSPTSGLADANDDTSHCDR
ISEKSHSQGHANGNSSAVEDENEDLLADFIDEDSQLPSRISKPMHAKNSTANWNDEEVSS
QTGSSICLLRLMDKYARLMQKLEIVNVEFFKGICQLFGIFYHFVFETFGQRDTSQSGKFP
PDYLPSRLKTALSKVLQDCDQWIRPQNLSFSSSSPTSLNTSFSHIDIMPTIPSSTIIGYA
PNTSFGLKERCAAADTISLIARVLHKSKAHIQSMLLQHNATIVEDFYGNVVDSVPDLTEH
IHRTTARMLLHISGYADKIANAKWEVKDLGLEHNGYVDLLLGEFKHYHTRLAHGGISKEV
QDLLLDYGLENVAETLIEGLSRVKRCTDEGRVLMSLDLQVLINGLQHFVSVGVKTKLQVV
ETFIKAFYLPETEYVHWARSHPKVYKSQIVDLVHLLATMKGWKRKTRLETIERIEASN
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgagatccatcggggcttccttcgttctccggcggcggaggtggaagcggcggc
gacggtcgatcgatcgacgatttcgaggtttctccagggccgctgctattcttgccgctg
ctcttgctccaaggaggcggcatggatctcactagggttggggagaagatcctcagctct
gttcgttctgctagatctcttggattgttgccagcaccgctggcttctgatcggcctgag
gtgccagctcgtgcagcagctgcagctgctgttgctcgagctttagctggaatgcctcca
catcaaagacttgcccttccatcaaattcagaagaaatggtctcaatttatggaaccagg
tcgcaagatcacgtcatagaagaactggaggaaaatttctatgaagaggattttgatcca
gtcaaatacattttggagaatattccatctgaagaagctgatgctttctattttgaagag
aaggcaactcttcggttactacagttggatagaataacagaacgtctgtcccgacatgtg
atggagcaccatgaagaaatggtgaaggggatgcaattagtgatggaactggagcaagac
ttaaaagttgcaaatgtcatttgcaggaatgggcgaagacacatatcttcttctatgcac
gaggtgtcacgggatctggttgtccattcaaattcaaaaaagaaacaagctttattggac
atacttcctattcttaccgatcttcatcatgctgtagacatgcagatggaacttgaaact
ctggttcaggaaggaaactacttccgggcatttcaactgttacctgagtacttgcaagtt
ctggagagttattccgaactctctgctgttcaagaaatgggccgtggtatagaggcttgg
ctaactaggacacttcaaaagcttgattcactattattaggagtatgccaaatgttcaac
aaagagagctacgtaactgcagttgatgcttatgccttagtaggagatgtagccggtctg
gccgagaaaattcagagcttctttatgcaggaagttctatccgaaactcattctgtattg
aaggatatcgtccaagaggaaattggaaacaatgcacagagaaacaggcttacatacagc
gatctctgctccttgatacctgaatccaagtttaggcagtgcttgttgaatactctggat
gcattatttaggctaatgtgttcatattatgcaatcatgagctttcagccagaggaaagg
ggttcagaatatcaaatctcaaacattgagttgagtagtagtaatggatctcaatgtggg
ggagatggtcttctatctgattcgggggtttcaagagatccaggtgatttgtttgaacca
gtcattgaagtaaaaggtctgtctccggaggagaatgctgatgcctcctgtgcctcattg
ggtggtgatataacaggacatggatccacatccccaagtacatcttctgtttccgtggat
gatgttcatatttctttgtcaagcagtgaatctcctttttatcagctaaggaaagatgcc
gctgcatttgtttctcaaactctggaaagaggacggagaaacttatggcaactaataaca
agtcgtgtatctgtattgctctcttgttctgctgttagctcaagcagcacattccagttt
ctgaaaaactatgaagatcttaatatatttattttggctggtgaagcattctgtgggctt
gaagctactgagttcaggcggagactaaggagtgtttctgaaaattacatggcagcattc
cacaagcagaatgtttatgcactcaaaatggtactggagaaggagagctgggttaagatt
tctggagacacacaccaagtaattagtctggccggtcttattggtgatggtgccccccta
attgtgtcctctgcaaccaatacttccacgttgtcattgcttcgctccaaaaaaatatca
gagaaggtcgacactgggaggcagaacaatggattttcttattggctaagaattagtaat
ccattttcatcaaagctgacaagtggctcttatgaatcattaaatgctcaaatattggtc
aatgggtcaccaacatcagggctggctgatgcaaatgacgatacctcgcattgtgataga
atttctgaaaaaagccactctcaaggtcatgctaatggtaatagctctgctgtggaagat
gaaaatgaggatcttctagctgactttattgatgaggatagtcagctgcccagtcgaata
tccaaacctatgcatgcaaaaaacagtactgccaactggaatgatgaggaggtttcttct
caaacagggtcctccatttgcctattgaggttgatggacaaatatgccaggctcatgcag
aaactagagatagttaatgttgagttttttaagggcatctgccagctgtttgggatattc
taccattttgtatttgaaacttttggtcagagggatacgagtcaaagcgggaagtttccg
ccagattatctaccatctcgcctcaaaactgcgttatcaaaagttctgcaagattgtgac
cagtggataagacctcaaaatctatcattttcttcctcctcgcctacatcattaaacaca
tctttctcccacattgacataatgcccactattccatctagcacaatcatcggatatgct
cctaatacttcatttggattgaaggaaaggtgtgcagctgctgacacgatctctcttatt
gctcgcgtgctacacaaatccaaagctcatatccagtccatgctattgcaacataatgca
actatagttgaagatttttatgggaatgtggttgattctgtaccagacctgacggagcat
atacataggacaactgcaagaatgcttcttcatatcagtgggtatgcagataagatcgcc
aatgctaagtgggaagtaaaagatctaggtctcgagcataatgggtatgttgacttgtta
ttgggagagttcaaacattatcatacaaggctcgcgcatggtggaatctctaaggaggtc
caagatctccttttagactatggacttgaaaatgttgcggaaacactcattgaaggtcta
tcacgagtaaagagatgcacagatgaaggaagagtgttgatgtcgttagatcttcaggtt
ttgattaatggactccaacactttgtctccgttggcgtcaagacaaaattgcaagtcgtt
gaaacattcattaaggccttttatcttccagagacggagtacgtgcactgggcacggtct
catccaaaagtatacaaaagccaaattgtagatttagttcacttattagccaccatgaag
ggttggaaaaggaagactaggttggagacaatagaaaggatcgaggcaagcaattga
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