Asparagus officinalis (garden asparagus): 109837327
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Entry
109837327 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC109837327
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109837327
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109837327
Surveillance factors
Other surveillance factors
109837327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
109837327
NCBI-ProteinID:
XP_020261109
LinkDB
All DBs
Position
4:complement(43787587..43800421)
Genome browser
AA seq
1608 aa
AA seq
DB search
MAEEKHDLGKNQAKGGSSARNDDEKVPLGVVDELKEQLTSENSIPLSPQWLYAKPTESKD
MRHGTSSETIHKDSWRLDGSQDKKEWRRNVPDMEPRRWRDEERETGLLSRRERRKEGDRE
NEYRKIDRRSDSNSTRETADSRILPSERWHEVSGRNSAHEGRRDSKWSSRWGPEDKDKDS
RTEKKTDVEKEDQHSEKQSFAGNNRPLNETDSRDKWRPRHRQEAPSGGPSVFRAAPGFSL
DKGRAEGSSVGFAPGRGRGNFTTGLRLSRVSSTGPIGAAPANTSDAQDVRSGLSSRAYRY
PRGKLLDIYRKQKALPNFDQSPEGLEDAPPITQSNSVAPLAFITPGPEEGAVLDDISKGR
IASSELSDNANKEVKKIVGSCEVDAGDTSLFERYEKSAINLVRNSGLHNEVMDISNELDS
GNISTLKSANKVLDTGVGTEFISVDADHYYGEVTGYIPGNTKEEVSGESVWKEDRKLEGS
SSISSFDVSIKLPNDSSSLFDMSVIQGTPNNGMQYQNNKEVKISKLTVPPEEMSLFYRDP
QGEIQGPFLGVDIISWFEQGFFGTDLPVCLTDAPTGTPFQPLGELMPHLTLSSNDTSVHY
PTEQCEPLDIVRSKLEVDTPASDGTGSFAGSDKRWTSSGTEGPLDLHIQPRMAGHDDFID
PPQGRLLTSNSDNPAGIPGSENQTIHGFAGQDAEEVLYTGRPASSIENPLGKLASDLREL
SQKPSAHQFLANEMGPRRLSSHTLSTDKDLNPLGLLWSELEGTHSKHPLSSNLVNDNSHG
RVNDVGGADSSFNVMGDPSVVRDTWSGHYRRNTSSNVLHDAMDASHLALVEQEANRISLE
EHLLAQQLQKQQLQLXSSSNICCLVRTCIHQSHLLNKFRDLFGVNSLNQSMPELEHLLKL
QLQEQQLHQQQQQQLHQQQQLHQQQQLQQQMQLMQQKQQQQQEQLLFEHLLHPQLRDPSF
AASHVDQVLYKQRLLHELQQQTHHVSRHEPSIEELIQAKFGHSLHPEHHGDLLERLHLGL
QPDQLSHSRHQPLRSMEXXXXQQFPLTSRHQLGIDKERNVGGLWSVDDSGQFIRTAGSSH
QAHSGRLGQLDLSQSFQRSSSYEQPSQLERNFMFHERSQRGNFERNPQLFERSNSVSAGF
PDPNVDIANALARLQSLDMQDLHGQMHPTIQRGQFPSGSAQHRASNQFAGSHLDAADTHW
SELNGQLSNSFAEAHFNQLHLEAEKQKRDMKLNLAGRDPNSWAALVGSDENSNQGLDDLL
HRNMLLQSSQALELGDAAQMSYKNRDASWPFSHSSSDHSFNVNVDKVGLVDSFRNDSLYN
QGQVQSDRFSANLERYENAGRLTSHSSSGTFMEHNQLFADAHDIGKEHLADSFGGDTSNK
VDSSDVMEGKRVEKRGFKGKLSKSLLDTTESSIEKFASSVTDQGDQEINARASHSFESFG
NNGGGSTIYSYDAGVDNAYGKDLVNQKVPGILPRARIDTQGGRSEHVTASSIKGNNPSTS
ISSGEGRREPGGNSSEATAPSNNKKEMRFRQSSSTSDAPEASFIEMLKSTKKIVPPEPEA
STESQDAGVKGGNSKKKGKKGRQIDPSLLGFKVHSNRIMMGEIHRPED
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaaagcacgatctgggcaaaaatcaggcgaaaggtggcagctctgcaaga
aatgatgatgagaaggttcctttgggggttgttgatgaattgaaagaacaactgacatct
gagaacagtatacctttatctccacagtggctgtatgctaaacccactgaaagcaaggac
atgcgccatggaacctcttcagaaaccattcataaagattcctggcgactggatggatct
caggacaagaaagaatggagaaggaatgtccctgatatggaacctcgccgctggcgtgat
gaggaaagggaaactggcttgcttagcaggcgagagcgcagaaaggaaggagatcgtgaa
aatgaataccgtaagattgaccgtcgttctgacagtaactccaccagggaaactgccgat
tctaggattttgccttcagaacggtggcatgaagttagtggtcgtaactctgcacatgaa
ggacggcgtgatagtaaatggtcatctcgatggggaccagaagacaaagacaaggactca
cgaactgagaaaaagacagatgttgagaaagaggatcagcattctgaaaagcaatcattt
gctggcaacaatcgtccactgaacgagactgattcccgtgacaagtggaggccgcgccat
cgtcaggaagctccatctggtgggccctcagttttccgtgctgctcctgggtttagttta
gacaaaggtcgagcggaaggttcaagtgtgggatttgctcctggaagaggtagaggaaac
tttaccacaggtctacgacttagcagagtgtcgtctactggccctattggtgctgcacct
gcaaatacgagtgatgctcaagatgtaaggtctggtttatcttcaagagcatatcgctac
ccgaggggtaagctacttgacatatatagaaagcagaaggcactcccaaattttgatcaa
tcacctgagggtcttgaggatgctcctccaataactcagtcaaactcagtggcaccactt
gcttttatcactcctggtccagaggaaggggctgttctagatgatatctcgaaggggagg
attgctagcagtgaactttctgataatgcaaacaaagaggtaaagaaaatagttggttcc
tgtgaggtggatgctggagatacttcattgtttgagaggtatgagaagtctgcgatcaat
ttagtgaggaacagtggtcttcacaatgaagtaatggatatatcgaatgaactagactct
ggaaatattagtacgctgaagtctgcaaataaagtgttggatactggtgttggaactgaa
tttatttctgtggatgctgatcattattatggtgaagtaacagggtacattcctggcaat
actaaagaggaagttagtggagaaagtgtatggaaggaagacagaaagcttgaggggagt
agctcgatttcttcctttgatgttagtattaagctgcccaatgattccagttctctgttt
gatatgtctgttatccaaggcactcccaataatggcatgcaatatcaaaataacaaggaa
gtgaagatttcaaaacttactgttcctcctgaggaaatgagtttgttctatcgagaccct
caaggggagattcaggggccatttttaggcgttgacataatctcctggtttgagcaaggg
ttttttggtacagatttacctgtatgtttgacagatgctccaacaggcacaccatttcag
ccacttggtgaattaatgcctcacttgactttaagttctaatgacacgtctgtccactat
cctactgagcaatgtgaacctttggatattgttagaagcaagctggaggtggatacacca
gcttctgatggcactggttcttttgctggtagtgacaaacgatggacatcatctggaact
gagggacctttggatcttcatattcagcctagaatggctgggcatgatgattttattgac
cctccccaaggaagattgcttacttcaaactcagataatcctgcaggaattcctggttcg
gaaaatcaaacaattcacggttttgctggtcaggatgctgaagaagtgctgtatacaggg
aggcctgccagtagcattgagaatcctttaggaaagcttgctagtgaccttcgtgagttg
tcacagaagcctagtgctcaccagtttttggcaaatgaaatgggaccgcgaaggttgtcc
agtcatacactttccacggataaagatctgaatcctctaggattgctttggtctgagcta
gagggaactcattcgaagcatcccttgtcatcaaacctggtcaatgacaatagccatggg
cgtgtcaatgatgttggtggtgcagattcctctttcaatgtaatgggagatccctcagtt
gtccgtgatacatggtccggtcactatagacgaaacactagctcaaatgttctccatgat
gctatggatgcaagtcacttggcacttgttgagcaagaggctaatcgcatcagtttggaa
gagcacctgttagcacaacagcttcagaaacagcagctgcagctgcnctccagcagcaac
atttgctgtctcgtcagaacatgcattcatcagtcccatttattgaacaagttcagggat
ctattcggcgtcaacagtctaaaccaatctatgccagagttagagcatttattgaaactt
cagttacaggagcagcagctgcatcagcaacagcaacaacagctgcatcagcaacaacaa
ctacatcagcaacaacaacttcagcagcaaatgcaattaatgcaacagaaacaacagcaa
caacaagaacaattgctttttgagcatttgctgcacccacagttgcgtgaccctagtttt
gcagcttcacatgttgaccaggttttatataaacaacgtctcttgcatgagttgcaacaa
cagactcatcatgtctcccggcacgaaccatctattgaggaacttattcaagcgaagttt
ggccacagccttcatcctgagcatcacggcgatctgttggagcgattacatctaggtctt
cagccagatcaactgtctcattctaggcaccagcctttgcgttccatggaggannnnnnn
nctcagcagttcccccttacatcgaggcaccagctaggcatagacaaagagagaaatgtt
ggagggctctggtctgttgatgactctggccagttcatcaggactgctggtagttcacac
caggctcattctggtagacttggccaactagatttgagccaatcttttcagagatcttca
tcctatgaacaaccaagccagcttgaaaggaacttcatgtttcatgagcgtagccagaga
ggaaattttgaaagaaatccacaactttttgagaggtcaaattctgtatctgcaggtttt
cctgacccaaatgttgacatagcaaatgccttggcacgccttcaaagcctggatatgcag
gatctgcatggtcagatgcacccaactattcagaggggacaatttccctctggaagtgct
cagcatcgtgcttcaaaccaatttgcaggttcacatttggatgcagcagacactcactgg
tctgagctcaatgggcagctatccaatagttttgcagaagctcacttcaaccagttgcat
cttgaagcagagaaacagaagagggacatgaaattaaatcttgcaggaagggatccaaat
tcttgggcagcacttgtgggaagtgatgaaaactccaatcaaggattagatgacttgctc
catcgaaatatgctcctccaatcctcacaagcattagaattgggtgatgctgcacaaatg
tcttacaagaacagagatgcctcttggcccttctcccattcttcctcagatcattcattt
aatgttaatgtagataaagtgggtttagttgattcctttagaaatgattctctttataat
caaggacaggtgcagtcagaccgttttagtgcaaacttagaaagatatgaaaatgccgga
agactaacttctcattctagttctggaacatttatggagcacaatcaactttttgcagat
gcacatgatattgggaaagaacatcttgctgattcttttggcggtgatacatctaataag
gtagactcatcagatgtaatggaggggaagagggtggagaagcgtggttttaaaggcaag
ttgagtaagtcattgctggacacgacggaaagcagcattgaaaagtttgcaagttctgtt
acagatcagggagatcaggaaattaacgcacgcgccagtcattcatttgaatcatttgga
aacaatggcggaggttcgactatctatagttatgacgcaggagttgacaatgcttatggc
aaggacctggttaaccagaaggtgcctgggatacttccaagagccaggattgatactcaa
gggggaagatctgagcatgtcactgcttcatccatcaaaggaaataatccatctacttca
atatcctctggagaagggagaagagaacctggaggaaattcttcagaggcaactgctcct
tcaaacaacaagaaggagatgagatttcgacaatcatcctcaaccagcgatgccccagaa
gcttccttcattgaaatgctgaagagcaccaagaaaatagttcctcccgagcctgaagct
tccactgagtctcaggatgctggtgtgaagggtgggaacagcaagaagaaagggaagaaa
gggaggcagattgacccttctcttctcggcttcaaggtacatagcaaccgtatcatgatg
ggtgagatccatcgtccagaggactga
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integrated database retrieval system
