KEGG   Asparagus officinalis (garden asparagus): 109837525
Entry
109837525         CDS       T05243                                 
Name
(RefSeq) LOW QUALITY PROTEIN: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aof03400]
    109837525
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    109837525
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-C3HC4_3 DEAD ResIII zf-C3HC4_4 RING_XB3-XBAT31 Prok-RING_4 Baculo_IE-1 UBA_Rad5
Other DBs
NCBI-GeneID: 109837525
NCBI-ProteinID: XP_020261399
LinkDB
Position
4:58148405..58176228
AA seq 1065 aa
MPPSLEESEALKPKFLLAEEIASIRSVIGGKIPESKIIGALTAAGNNPDRAVGILLDSPE
LIADPKPVEKEVESELPIKATEPKIVEKDTEVSLEEEVGDNSSLLESNIVSNKKKQGTKV
EMADSNRVATPKKEALEEYEKVLARSHCAPYLNPRPIRAIKPETVTDRRIQLVPEVDAAE
FAEFPEEGNWVFIGRTYVAGLSTCRGKKKIDPGEIVYFTFPKTDFQKQYGRRWVRVKAAA
ASSEIVRFSTKRAGEIGKLPPEWSTCLIPLVNSSKVKVKGRCVTATTELRLMQDXLLYVS
LYIHSSIFTEGDKSSFKLEASAPIDPNVCPLPTLFRLMKMKPVQKAEFTPEDLDSGKRTL
SLRGDGESQIVGLAKRRKTGTTYAEQDEDEQAISEASLNKLVGTAEFYDLEEAEPPSTLL
CSLWPYXKQALYWMSKLEKGQQAEKTLHPCWAEYNICDTRASTIYVNIFSGEAIADFPSA
TQMARGGILADAMGLGKTVMKISLILANPRGRSXNHDIEMENPEEESNFVKGGTLIVCPM
ALLGQWKDELETHSRHGSISVFIHYGCDRTNDPREIAIYDVVLTTYGVLQSSFKSNSNSK
PSIFHRINWYRVVLDEAHTIKSSKAQVAQSAFALTAYCRWCLTGTPLQNNLEDLYSLLCF
LKVQPWCNWALWQKLIQGPYEKGDEKGLRLVRGILRSLMLRRTKDTKDTNGRPILVLPPA
TVQIVECEQSEAERVFYDALFRKSKVKFDQLVAQGKVLHNYASILEFLKLRQCCNHPFLV
VSQKGNQKYADLNKLARHFLHESNSAPSKAYVEEVIDGLRRGDVTECPICLESASDDPVL
TPCAHRMCRECLLASWSSPAGGPCPIFRKALTEASLITCPYENNFQVDAHENWKDSSKVA
ELLKCIESIKRSGSGEKSIVFSQWTSFLNLLEIPLRKKNIGYLRFDGKLNQKNRERVLKE
FNETRDKTVLLMSLKAGGVGLNLTAACFQCLSDPWWNPAVEEKAIMRIHRIRQKRKVIVR
RFIVKDTVEERMQQVQVKQQRMIAGALTDDEVRTARLEELKMLFR
NT seq 3198 nt   +upstreamnt  +downstreamnt
atgccgccatcacttgaggaatccgaagctctcaagccaaagttcttgctcgccgaagag
atcgcctccatccgatcagtaatcggcggcaaaatccccgaatcaaagatcatcggagcc
ctcaccgccgccggaaacaaccctgatcgcgctgtcggcatcctcctcgactcgccggag
ctaatcgcagacccaaaacccgttgaaaaggaggtagagtccgaactccccataaaagct
actgagcctaagatcgtcgaaaaagacactgaagtcagtcttgaagaggaggttggtgat
aactcgagtcttttagaatcaaatattgtttctaacaagaaaaaacaaggaacaaaagtt
gagatggctgattctaatagagttgctactccaaagaaggaggctttagaagagtatgag
aaggttttagcaaggagtcattgtgctccttatcttaatccaaggcccattagggctatt
aagccggagacggtaacagatcgaagaattcaattggtgcctgaggttgatgcagctgag
tttgccgagtttcctgaagagggcaattgggtttttatcgggagaacttatgtagctggg
ttatcgacttgtcgagggaagaagaagattgatcctggtgagattgtttactttaccttt
ccaaagactgattttcaaaagcaatatgggagaaggtgggtgagggtgaaagctgcagct
gcatcgtcggagattgtaagattttctaccaagagagctggagagattggtaagcttcca
ccagaatggtcgacgtgtctcattccgcttgtgaattcgtctaaggttaaggttaaggga
cggtgtgtgactgcgacaactgaacttagattgatgcaagatnttttgttatatgttagc
ttatacattcatagttcgatttttacggaaggggataaatcttcatttaagctagaagct
tctgcaccgatagatcctaatgtttgtcccctcccaactctcttcagactaatgaagatg
aaaccagttcaaaaggcagaattcactcctgaggatcttgattccggaaagcgaactcta
agtttaagaggtgatggtgaatcccaaattgtgggtcttgcaaaacggcgaaaaacaggc
actacttatgctgaacaggatgaagatgaacaagcgatctctgaggcctctttgaataaa
cttgtcggcactgcagagttttatgacttagaggaggcagaacctccaagcacactcctc
tgtagtttgtggccatactaaaaacaagccctctattggatgtcaaaactagagaagggg
cagcaagcagaaaagacacttcatccttgttgggcagagtacaatatttgtgatacgaga
gcatcaactatatatgtgaatattttctctggagaagctatagctgattttcctagtgca
actcagatggcacgaggagggattttagcagatgcaatggggcttggaaagactgtcatg
aaaatttctctaatacttgcaaatccaaggggaagatcatgaaaccatgatatagaaatg
gagaatcctgaggaagaatcaaattttgtaaagggaggaaccctaattgtttgtcccatg
gcattacttggccaatggaaggatgagctagagacccattcacggcatggttcaatttct
gtattcattcactatggttgtgacagaacaaatgatcccagagaaattgccatttatgat
gtcgtattaacaacatatggggttctacaatcatcttttaaatctaattcaaattcaaag
ccgagcatatttcacagaattaattggtacagagtggtactagatgaagcacacaccatc
aaatcttcaaaagctcaagtagcccaatcagcctttgctctaactgcatactgccgttgg
tgtcttactggtactcctcttcagaataatttggaagatctctacagcctcctttgtttc
ttaaaggtccagccatggtgtaattgggcattgtggcagaaactgattcaagggccttat
gagaaaggtgatgaaaaagggttaagattggttagaggtattctaagatcactgatgctt
agaagaacgaaggacacaaaggatacaaatggaaggcccattctcgttctgcctcctgcc
actgtacagattgtggaatgtgaacaatcagaagctgagcgtgttttctatgatgctctt
ttcaggaaatcaaaggtcaagtttgatcaattggttgcacaaggaaaagttcttcacaac
tacgcttccatactagagtttcttaaattgaggcaatgctgcaaccaccctttcctagtt
gtcagtcaaaagggaaatcaaaagtatgcagatctcaacaaactagcccgtcattttcta
catgaatcaaactcagcccccagcaaagcatatgtagaagaagtaattgatggacttcgt
cgaggggatgtaacagaatgcccaatttgccttgaatcagcatcagatgatccagtgctc
actccatgtgcacatagaatgtgcagagagtgccttcttgctagttggtcgagtccagct
ggtgggccatgcccaattttccgcaaggctctgactgaagctagccttattacatgcccg
tacgagaataattttcaggttgatgcacatgagaactggaaggattcttcaaaggtcgct
gagctccttaagtgcatagagagcattaagagatcaggttcaggtgaaaagagcattgtg
tttagccaatggacttcattcttgaatttgctcgagattcctcttcgtaagaaaaatatc
ggatacttaaggtttgatggaaagctgaatcagaagaatagggaaagggtcttgaaggag
ttcaatgagaccagagataagacggtcttgttaatgtcactgaaggctggaggtgtagga
ttaaatctgactgctgcttgcttccaatgtctttctgatccttggtggaatcctgcagta
gaagagaaagcgatcatgaggattcatcgaattaggcagaaaaggaaggtcatagtgagg
aggttcattgttaaggacacagtggaggagaggatgcagcaggtgcaggtgaagcagcag
cgaatgattgcaggtgctctcactgatgatgaagtcaggaccgctcgtcttgaggagctt
aagatgctcttcagataa

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