Asparagus officinalis (garden asparagus): 109837694
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Entry
109837694 CDS
T05243
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109837694
Enzymes [BR:
aof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
109837694
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109837694
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
109837694
NCBI-ProteinID:
XP_020261614
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All DBs
Position
4:complement(71008624..71022946)
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AA seq
578 aa
AA seq
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MGYSGSESDESDLEVKSRAIDEDKAKVEEEAEEELRLNIKEEFDEFRLPTEEELEEEAHQ
PPNLSKLQRRIKEIVNVLSNFKKLRHDGASQKDYVEQLKVDLGSYYGYNDFLIGALVEMF
PAAELVELLEAMEKSRPECLRTNTLKTRRRDLAGVLINRGVNLDPIGKWSKVGLVVYESQ
VPIGATPEYMAGHYMLQGASSFIPVMALAPQEKERIVDMASAPGGKTTYIAALMKNTGII
YANEFKEPRLKSLTANIHRMGVTNTVICNYDGKELPKVLGLNSVDRVLLDAPCSGTGTIW
KDQNVKTSKTLEDLQNCAFVQKQLILAAIDLVDANSKSGGYIVYSTCSMMIPENEAIIDY
ALKKRDVKLVPCGLDFGRPGFIRYREHRFHPSLEKTRRFYPHVNNMDGFFVAKLKKMSNT
KPVVSEPSKRAEKTEQAEAIDDTVDAQTNIPIVKVKKMELEKKDGRKENIKGATKEEGKL
EKQSKSKQAGTKSFVPLKKRQVAVVDDGEKGESITNEKFNKYKFWEKRKKLKNNATKKNG
KVIPSSTVRTKKKRKLPSKEEISQAREEKRKALKKRKI
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggggtactctgggtcggaatcggatgagagcgatttagaggtcaagtctcgagcgatt
gacgaggacaaggcgaaagtggaagaggaagcggaggaggaattgaggttgaatataaag
gaagagtttgacgagttcagattgcctacagaagaggaactcgaagaagaggcacatcaa
cctccgaacctctcaaaactccagcgcagaataaaagagattgttaatgtgctctcaaat
ttcaaaaaattgagacatgatggtgcttcacagaaggattacgtggagcagctaaaggtg
gacctgggttcttattatggctacaatgattttctcattggggctcttgttgagatgttt
ccagctgcggagcttgttgaactcctggaagctatggagaagagtcgacctgaatgcttg
cgaacaaacactttaaagactcggagaagggatctggctggcgtcctgataaatagagga
gttaaccttgatcctataggcaagtggtcaaaggttgggttagtggtgtatgagtcccaa
gttcctattggtgcaacccctgagtatatggctgggcattacatgctgcaaggtgcaagc
tctttcatacctgtgatggcacttgctccgcaggagaaggagcggattgtcgatatggcg
tctgctccaggtggaaaaacgacatatatcgctgctcttatgaaaaatactggtataatt
tatgcaaatgaatttaaggaaccaaggctcaagtcactaactgcaaatattcatcggatg
ggcgtgacaaatactgtaatatgcaactatgatgggaaggagctacctaaagtcctggga
ttaaattctgttgatagagtattgctggatgctccctgcagtggtactgggactatatgg
aaagatcaaaatgttaaaacctcaaagacccttgaggatttacagaactgtgcttttgtt
caaaagcaacttattttagcagcaatcgacttggtagatgctaattctaaatctggagga
tacatagtttactcaacatgctccatgatgatccctgagaatgaggcaattattgattat
gctctaaagaagagagatgtaaagcttgtgccatgtggtctagattttggtcgcccaggg
tttatacgctatagagagcaccgattccatccctccttggaaaaaacaaggaggttttat
ccccatgtaaataacatggatggattttttgttgctaagctaaagaagatgagcaatacc
aaaccggtggtatctgaaccttctaaacgagcagaaaagacggagcaagcagaagctatt
gatgacactgtggatgctcaaacaaacatcccaattgtaaaagttaaaaagatggaactc
gagaaaaaggatggcagaaaggaaaatatcaagggcgccacaaaagaggaagggaagttg
gagaagcaaagcaaatcaaaacaagcaggaactaagtcctttgttccactgaaaaagaga
caagtggcagtcgttgatgatggtgagaagggtgaaagtatcacaaatgagaaatttaac
aagtataaattttgggaaaaacgtaagaaattgaagaataatgcgactaagaagaatggg
aaagtgataccttcatcaacagtcagaacgaagaagaaaaggaagttaccttcaaaggag
gaaatttcacaagctagggaagagaaaaggaaagccttgaagaagagaaagatttga
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