KEGG   Asparagus officinalis (garden asparagus): 109837709
Entry
109837709         CDS       T05243                                 
Name
(RefSeq) SKP1-like protein 12
  KO
K03094  S-phase kinase-associated protein 1
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03083  Polycomb repressive complex
aof04120  Ubiquitin mediated proteolysis
aof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109837709
   04120 Ubiquitin mediated proteolysis
    109837709
  09126 Chromosome
   03083 Polycomb repressive complex
    109837709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aof04131]
    109837709
   04121 Ubiquitin system [BR:aof04121]
    109837709
   03036 Chromosome and associated proteins [BR:aof03036]
    109837709
Membrane trafficking [BR:aof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    109837709
Ubiquitin system [BR:aof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     109837709
   Cul7 complex
     109837709
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     109837709
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     109837709
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 109837709
NCBI-ProteinID: XP_020261641
LinkDB
Position
4:72214705..72224394
AA seq 178 aa
MASSSPAPSREKRPSAAVNGGGDAGGPKPMERSKKTVVLRNKGPELFEVEEAAARLSVIL
GHQIDNGYDPIFADMQSSILTKIIEYCNKHSPSAPSTKEELDEWDSEFAGSFDFETLLHL
VEAANYLSIKGLFDLVCKTIAGKIEDKSVDVIRTMFNIKNDFTLEEEKKLREECYLYK
NT seq 537 nt   +upstreamnt  +downstreamnt
atggcttcctcatcgccggcgccttcccgcgaaaagcggccatccgccgccgtcaacgga
gggggcgacgccggaggcccgaaaccgatggaacgctcgaagaagacggtggtgctgagg
aacaagggacctgagctcttcgaggtggaggaggcggcggccaggctgtcggtgatcctc
ggccaccagatcgataacggttacgatcctatcttcgctgacatgcagagctcgatcctg
acgaagatcatagagtactgcaacaagcactccccctcggcgccttcgaccaaagaggag
ctcgacgagtgggactctgagtttgccggctccttcgatttcgaaacacttctccatctc
gtcgaggctgcaaattatctcagcattaaaggattgtttgatttggtctgtaaaaccata
gctggtaagatagaggacaaatctgttgatgtaattcgcaccatgttcaacattaagaat
gacttcacacttgaggaagagaaaaagcttcgtgaggagtgctacctttacaagtaa

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