Asparagus officinalis (garden asparagus): 109837722
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Entry
109837722 CDS
T05243
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109837722
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109837722
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109837722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_4
Prok-RING_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
109837722
NCBI-ProteinID:
XP_020261655
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All DBs
Position
4:complement(72498430..72506663)
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AA seq
288 aa
AA seq
DB search
MMNCSSKYSPLENLRLVLAVSSLFLFARSAALVNLRGKSFSFTFLDAPARFALKAGSGIC
GSLQLADPIEACSPLRNDNETGGGSSRFVLIARGDCSFEKKVRIAQDIGFEAAIIYDDQE
KSSLYSMIGDSTGIHMHAVFVSKMAGETLKKFARGEEGECCIGSSMDETAGTVLVISFVS
LVVIISVLAAFLFARNCRLLRHAARHSRPTTMNRQSVELLPCFTFKSAYVNSKRTADTCA
ICLEDYKDGERLRVLPCLHEFHSICVDSWLTKWGTFCPVCKHEMNSGE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattgctcctcgaagtatagcccgctggaaaatttacgactggtcctcgccgtc
tcctcccttttcctcttcgcccgctccgccgccctcgtcaacctccgcggaaaatccttc
tccttcaccttcctcgacgcccccgctcgctttgccctaaaagctggatcgggtatttgc
gggtcccttcagcttgcggatccgattgaagcttgctctccccttcgaaacgataacgaa
actggtggagggagctcgaggtttgttttgatcgcgaggggagattgcagcttcgagaag
aaggtgaggattgctcaggatatagggtttgaggccgccattatctatgatgatcaagaa
aagagcagcctttactctatgatcggcgactcaactggcatccacatgcatgcagtattc
gtttcaaagatggccggggaaaccctgaagaagtttgctcgcggagaagaaggggaatgt
tgtataggttcatcaatggatgagactgctggaactgtgttggtaatttcttttgtctct
cttgtggtcataatatcagttctagcagcatttctctttgctcggaactgtcggcttctc
cggcatgcagcaagacacagccgtcctactacgatgaataggcagtctgtggaacttctt
ccttgcttcacatttaagagtgcctatgtaaatagcaagagaactgcagacacttgcgcc
atctgccttgaagattataaagatggagagagactgagagttcttccatgtctacatgag
tttcattcaatctgtgtcgactcctggttgacaaagtggggcactttttgcccagtttgc
aagcatgagatgaactcaggagagtaa
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