Asparagus officinalis (garden asparagus): 109837907
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Entry
109837907 CDS
T05243
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109837907
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109837907
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109837907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
PCP_red
bHLH_ILI
Telethonin
Motif
Other DBs
NCBI-GeneID:
109837907
NCBI-ProteinID:
XP_020261880
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All DBs
Position
4:100672767..100679842
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AA seq
185 aa
AA seq
DB search
MESPPDNDVCSVCHDSFSLPCQANCSHWFCGQCILRVWHHGSALQACKCPICRRFITLLI
PAEVAQRQHHDPEASRVLQEIEKYNRVFGRGSNSLMQRLRDLPFFVRRMLRELMDPQRSL
PFVFRARMIFAMVLSGVYVLSPVDILPERVLGLVGLLDDFLVLLIVFLHLAAIYRSLLLH
RHGGY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgccgcctgataacgacgtctgctcagtttgccacgacagcttcagcctccct
tgccaggccaactgctcccattggttctgcggacagtgtatactgagggtgtggcatcat
gggtctgcacttcaggcctgcaaatgtcccatttgtcgccgttttattactttgctgata
cctgctgaggttgcacagcgtcagcatcatgatccggaagctagtcgagttctgcaagaa
atagagaaatataaccgtgtgtttggcagaggctcgaatagcctcatgcagagattgcga
gaccttccattttttgttcgaagaatgctaagagaactgatggatccgcagagatccctt
ccttttgtttttagggcacggatgatttttgcaatggttctaagtggagtatatgtactg
agccctgtggacattcttccagaaagagttctggggctggtaggtttactagatgatttc
ctcgtattgctaattgtttttctccatctggctgctatataccggtctttgcttcttcat
cgacacggaggctattga
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