Asparagus officinalis (garden asparagus): 109837947
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Entry
109837947 CDS
T05243
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109837947
03036 Chromosome and associated proteins [BR:
aof03036
]
109837947
Spliceosome [BR:
aof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109837947
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
109837947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
Lsm_interact
ARM_TT21_5th
DUF630
UTP6_C
Motif
Other DBs
NCBI-GeneID:
109837947
NCBI-ProteinID:
XP_020261924
LinkDB
All DBs
Position
4:107221940..107264833
Genome browser
AA seq
848 aa
AA seq
DB search
MDESAAKSMEIDEPRTEAGDAERGPEPKNPSSHSSSSSSDSDSDEEGVDETQLLTLESQL
QENPWNYEAHVQYIQSLRRLGHIEKLRKARESMKEHYPLTPKMWQEWAKDEVSLNRSSEV
FADIEKLYECGVHEYLSVPLWCDYLNFVQECDQLVSQCAPDGILKMRSLFERALTAAGVH
VVEGSKIWEAYREYEQAIFLTIGDDNNEEKSKQVDRIRTLFHRQLSIPLVDLESTLVNYR
LWEVEQGNTSDMNSELDGVPANVVSAYKKALEMYNARSMYEDQLSKSDISDPDRFQSFMN
YIKFEESSGDPARVQVLYERAVSKLPLFSELWLKYCSYLDTTLKVSHIVKDVYSRAVRNC
SWVGDLWVRYLLSLERLGASEKELSAVFERSIQCVFQSFEEYLNLFLTRIDGLRRRISFD
GKKEDGLHYTLIRDMFQRAADYFSAEMIRIDDLLRLYSYWARLEVTLGKDIVAARDVWES
LIKKSGSILEVWQGYIEMRIGFGHINEARSLYRRCYTKRLSGTGSEEICYSWLRFEREYG
TLGDFDLALSKVTPRLKELEMFKTQQEINGSSFPAKENNLVSRNVPEKRKMITSTSVKQP
PSKRRKDAAPKAGEVSHADSIKNSKNKHDAEVTDKAEAATSSKSVEIDANTKQSKRNLYT
DQCTAYISNINLEAKEEHLREFFSDGGGVTAIRLPKDKQTGKQRGFAYVDFSDEEHLAAA
IAKNKQKMLGKKLSIARADPTQGRKKAPAVSASSDPMQGQKKAPAFSNSSRGRGRGAPFR
NEHGGTSRTAKVVVTEGESEVKPIGRNTFFAAPRAVRSLAGSNKEPKGADNIEEPKSNDE
FRAMLLKK
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatccgcggcaaaatcaatggaaatcgacgaacctcgtactgaagcgggagat
gccgagcgaggaccagaacccaaaaaccctagctcccattcctcctcctcctcttcggat
tccgattccgacgaggaaggagtagacgagactcaactcctaaccctagaatctcagctc
caagagaatccatggaactacgaagctcatgttcagtatattcaatctctgaggagactt
gggcatatcgagaaattaaggaaagcgagggaatccatgaaggagcattaccctttgacc
cctaaaatgtggcaggagtgggccaaagatgaagtttccttaaataggagttcagaagtt
ttcgctgacattgaaaagctttatgaatgtggagtacatgagtacttgtctgtgccgttg
tggtgtgattacttaaattttgttcaagaatgcgatcagttggtgtctcaatgtgcaccg
gatggcatcctaaaaatgagaagcttatttgaacgggctcttactgctgctggagtgcat
gtggttgaaggcagcaagatatgggaagcatacagagagtatgaacaagcgatctttttg
acaattggtgatgacaataatgaggaaaaatcaaaacaggttgatcggatacgtacttta
ttccatcgacaactatctatccccttagtggatttagaatcaacattagttaattacagg
ctttgggaggtggaacaagggaacactagcgatatgaactcggaattggatggggtccct
gctaatgttgtctctgcatataaaaaagctttggaaatgtataatgctcgaagcatgtat
gaggatcaactgtctaagagtgatatttctgatcctgatagatttcagtcttttatgaac
tatatcaaatttgaagagtcctctggtgatcctgctcgtgtgcaggttctttatgagcgt
gctgtctccaagttacccttgttcagtgaattatggttaaaatattgtagttatttggat
actactttgaaggtatctcacattgtcaaagatgtgtattctagagctgttagaaattgt
tcatgggttggagatctttgggtccgttacctgctgtcattggagcgcttaggtgcttca
gaaaaggagctgagcgctgtgtttgagcggtccattcaatgtgttttccaaagctttgaa
gagtatttgaatttatttcttacccgaattgatggtctaaggcggaggatttcttttgat
ggaaaaaaagaggatgggctgcattatactctgataagggatatgtttcagcgagctgct
gattacttctctgcagagatgatcagaattgatgatttattgcgtttgtattcttattgg
gctcgtttagaggttacccttggaaaagatattgttgcagctcgtgatgtttgggaaagc
ttgattaagaaaagtggatctatactggaagtgtggcaaggttatatagagatgagaatt
ggatttggtcatataaatgaggcgcgatccctttataggagatgctacactaaaagatta
tcaggaacaggttctgaggagatctgttactcatggctgcgttttgaacgggaatatggc
acattaggcgattttgaccttgcgttgagtaaggtaacaccacgcctgaaagagctggag
atgttcaagacccaacaagagataaacggctcttcatttcctgcaaaagaaaacaatttg
gtttcaagaaatgttcctgaaaaaagaaagatgataacatcaaccagtgttaagcagcct
ccctcaaagagacggaaagatgcagcacctaaagctggcgaagtatctcatgcagattca
attaagaactccaagaataagcatgatgcagaagttacagataaagcagaagctgccact
tcatctaaatctgtggaaattgatgccaacactaaacaatctaagagaaacttgtacaca
gatcagtgcacagcatatatttcgaatattaaccttgaggcaaaggaggagcacttgcgt
gaattcttttcagacggcggtggagtaactgctatacgtctaccgaaggacaaacaaact
ggcaaacaaaggggatttgcatacgtggatttttcagatgaggaacatctagcagcagcc
attgctaagaacaagcagaagatgcttgggaaaaaattaagtatagcacgtgcagatcca
acgcagggccggaaaaaagcccctgctgttagtgcttcatcagatccaatgcagggccag
aaaaaagcccctgcttttagcaattcatctcggggtcgtggtagaggagcacccttcaga
aatgaacacggtggcacttcaaggactgctaaagttgtggtcacagagggtgaaagtgaa
gtaaaacccatagggaggaataccttctttgctgcacccagggcagttagatcccttgcg
gggagtaacaaagaaccaaagggtgcagacaacatcgaggaaccaaaatctaatgatgaa
ttccgagcaatgcttttgaagaaatga
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integrated database retrieval system
