Asparagus officinalis (garden asparagus): 109838056
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Entry
109838056 CDS
T05243
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Module
aof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109838056
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109838056
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109838056
NCBI-ProteinID:
XP_020262099
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Position
1:complement(99767014..99776673)
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AA seq
360 aa
AA seq
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MLIFGLATLLEVGIAGAGPPPVFNVLNFGAKGDGFADDTQMEGTLIAPNDPRWWKGIDPS
RWLQFQHVGTLNVFGGGIINGRGQNWWKQSCKDNPKPGCTHKAPTAITFEDCNDLWVRDL
QSIDSPQVHMLLFNCQRATLSNLKMVAPELSPNTDGIHVQNSQHVYIQNSTMQTGDDCIS
IGDLVNDVHIDQIVCGPGHGISIGSLGRYGSAASVEGITVRYSNFYGTTNGVRIKTWQGG
KGFVRGIRFEHCNFTKVDNPVIIDQYYCDSPSKCPPQKNAVQISNVTYANLYGSSSTPVA
AFRKALALISGAGSDTSTMIISEYRTVFVKPISFISPCNSGHVMIASLLETMSMILTSRA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgctaatatttggcctagccactttgttagaagttggcatagctggtgcaggccctccg
cctgtattcaacgtcctaaacttcggagcgaagggagatggttttgcagatgacacacag
atggaaggcacactgatagcaccaaacgatcccaggtggtggaaaggaatcgatccatct
cgctggttgcagtttcagcatgttggtacactgaatgtctttggtggaggtataataaat
ggtcgagggcaaaattggtggaaacaatcatgcaaagataacccaaaaccgggatgcact
cataaagcaccaactgcaataacatttgaagattgcaatgacctctgggtgagagatctg
cagtctattgatagtccacaagtacatatgcttctctttaactgtcaacgagcgactctt
tcaaatctcaagatggttgctcctgaacttagccccaacactgatggtatccatgttcaa
aattcacaacatgtatatatccagaattcaaccatgcaaacaggtgatgattgcatatct
attggagatcttgttaacgatgttcatattgaccagattgtctgtggaccaggacatggc
attagcattggaagcttaggaaggtatggcagtgcagcttcagtcgaaggtataaccgtt
aggtattcaaacttttatgggacaacaaatggagtaagaatcaagacatggcagggagga
aaagggtttgtaagaggaatcaggtttgagcattgcaacttcaccaaagttgataatcct
gtaatcattgaccagtattattgtgattcccctagcaagtgcccacctcagaaaaatgca
gttcaaatcagcaacgtaacatatgcaaatttgtatggaagttcaagcaccccagttgca
gcgtttcgaaaagcattggctttaatttctggagcaggttcagatacttctactatgatc
atatcagagtataggactgtctttgtgaagcctatatctttcattagcccatgtaattct
ggccatgtgatgattgcatctctactagagactatgtctatgatattgacatcgagagca
taa
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