Asparagus officinalis (garden asparagus): 109838057
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Entry
109838057 CDS
T05243
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109838057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109838057
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109838057
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_8
STAS_2
Motif
Other DBs
NCBI-GeneID:
109838057
NCBI-ProteinID:
XP_020262098
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Position
4:complement(121455339..121465755)
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AA seq
372 aa
AA seq
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MVGGRPVTGNLDFWFRNLMVADGAEKMEGVALNGWKDLPMELLLRIVSLGDDRTVIVVSG
VCTGWRDAICAGLGRLCLSWCKDNMNNLVLSLAPKFAKLQTLSLRQNKPQLEDNGVETIA
NYCHDLRELDLSKSLRLSDQSLYALAHGCPRLTKLNISGCSSLGDAALAYLTSFCRNLKN
LNLCGCVRAASDRALQAIGLNCRQLQTLNLGWCETVTDKGVIGLALGCPDLRALDLCGCI
LITDESVIALANGCPHLRSLGLYYCQNITDRAIYSLAENSRVKRKHVWDSVHRSHSSSNN
EKEGLMNLNISQCTALTPNAVQTLCDSFPALHTCSGRHSLIISGCLSLTSVHCACAVQAH
PRAGIGLADHAY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggttggagggaggcctgtaactgggaatttggatttttggtttaggaacctgatggtt
gctgatggtgcggaaaagatggaaggagttgccttgaatggatggaaggatcttccaatg
gagctcctactgaggatcgtttccctcggcgatgatcgaacggtcatcgtcgtgtcgggg
gtctgcactggatggagagatgctatttgtgccgggttaggtcgcctttgtctgtcatgg
tgcaaggataatatgaacaatcttgtgctgtcgttggctccaaaatttgcaaagcttcag
actctttccttacgccagaacaaacctcaacttgaggacaacggtgtagaaacaattgca
aactattgtcatgatttgcgagaattggacctaagcaagagcctcaggcttagtgaccaa
tcattgtatgccttggctcatgggtgcccacgccttaccaaactcaatatcagcggttgc
tcgtcccttggtgatgctgcccttgcctatttgactagtttctgcaggaacctaaaaaac
ttgaacctatgtggctgtgtgcgagctgcatctgacagagccttgcaggcaattggactt
aactgtaggcagttgcagacattaaatctgggttggtgtgagactgtgactgataaggga
gtaatcggtttggcactaggatgtcctgatttgagagctttggacttgtgtggttgcatt
cttataacagatgagagtgtaattgctttggcaaacggctgccctcacctgagatcctta
ggcttgtattactgccagaacataaccgatagagcaatatattcactggcagaaaacagc
cgagtaaagagaaaacacgtgtgggattcagtacatcggagccacagcagtagcaacaac
gagaaagaggggcttatgaacctcaacatcagccagtgcactgcattaacccctaatgct
gttcaaactctgtgtgactcgtttccagcgcttcacacttgttcagggcgtcattcactt
attattagcggatgtcttagccttacttccgtgcactgtgcttgtgcggtacaagctcat
cctcgtgctggtatcgggctcgcggatcatgcttattga
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