Asparagus officinalis (garden asparagus): 109838093
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Entry
109838093 CDS
T05243
Name
(RefSeq) uncharacterized protein LOC109838093 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109838093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109838093
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109838093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
109838093
NCBI-ProteinID:
XP_020262151
LinkDB
All DBs
Position
4:complement(126303042..126331283)
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AA seq
524 aa
AA seq
DB search
MMKRGAKVAALFDSDPDPSDSALRSKRVMDAPSFDGHRAESSRQNRMEGIKLDAKRAESA
RQHVRALNTQFASWIQLQLQNHPDELWEDGAKDYLSHASNILGKFKDVVDWLKAEAAKSQ
TGATKGFPSDHSKSVAVLGNSLPIVKPEVNNGSAQEVRSSSLQIPKLPNSHGSGVFSVRQ
PSSSSSSLQNSGLPTLQNSSPFPFSQKPASSNFQSSSLSNTQNTGLFGISKISDCSSLQS
AGSSTSQASGFFSFSQTPIHSSLQNSGSSGSPASGFFSFSQTPMSSSLQSSGLPSSQSSG
LFGISQIPASSSSPSSMLSSSQMTGFSSNQKPANSSLQTSGLTSSQSSGFFSMNQTPVFG
GTQSFTTPKVGTSEDVDEGDELEQPSSPSLKRTEEKGVIIVHEVKCKVYVKPDNSAAWKD
IGVGQLSIKCQEGADKAAKESKPTIMIRNDAGRILLNALIYPGIKMNIKKNTIATIFHTS
DGGPNDGVEAGKSNVVTRTYLLRLKTEDETTKLAAAIQDYAPSA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgaggagcgaaggtcgctgctctcttcgattccgatccggatccctccgat
tccgctttgaggagcaagagagtgatggacgcgccgtcttttgatggtcacagggcggag
tcgtctcgtcagaatcggatggaggggatcaaattggatgcgaagcgggcggagtcggct
cgccagcatgttagggccctcaatacccagtttgcaagttggatccagttacaattgcaa
aatcatccagatgagctttgggaggatggcgcaaaagattatttatctcatgcatcaaac
atattgggaaaattcaaggatgttgttgattggcttaaagcagaagctgcaaaatcacaa
actggggcaaccaaaggctttcctagtgatcatagcaaatctgtggctgtattaggaaac
tctttacccattgtgaagcctgaggtaaacaatggttctgcacaagaggttagaagttca
agtttgcaaatcccaaaattacctaattcgcatggttcaggcgtcttttctgtacgtcaa
ccatcgtctagctcttcatctttgcaaaactcaggcctaccaactttacagaattcaagc
cccttccctttcagtcaaaaaccagccagctcaaattttcaaagttcaagtttatctaac
acacagaataccggtttatttggtatcagtaaaatatcagactgttcaagtctgcaaagt
gctgggtcttctacttcccaagcctctggtttcttcagttttagccaaacaccaatacac
tcaagtttgcaaaattctggatcatctggttccccagcctctggtttcttcagttttagc
cagacaccaatgagttcaagtttgcaaagctctggtttacctagttcacagagctcagga
ttgtttggaattagtcaaatacctgctagctcaagttcacccagctccatgctctctagt
tcacagatgacaggtttttccagtaatcagaagccagccaattcaagcttgcaaacctca
gggttaaccagctcacagagctcaggtttcttttccatgaaccaaacaccagtttttggt
ggaactcaaagttttaccacgccgaaagtaggaacctcagaggatgttgatgaaggagat
gaactggagcagccaagcagtccttccttgaagaggactgaagagaagggagtcatcatt
gtccatgaagtcaaatgcaaagtctacgtgaagccagacaactctgcagcctggaaagat
attggtgtaggtcaattgtccatcaaatgtcaagaaggtgccgacaaagctgcaaaagag
tcaaagcctactattatgattcgaaatgatgctggaagaattttgcttaatgctttgata
taccctgggataaaaatgaacattaagaagaataccattgccacgatatttcatacttca
gatgggggtccaaatgatggagttgaagctggcaaaagcaatgtagtgacgcgaacatac
ttactgaggcttaaaactgaggatgagaccacaaagcttgcagctgcaatccaggactat
gctccatcagcctaa
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