Asparagus officinalis (garden asparagus): 109838298
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Entry
109838298 CDS
T05243
Name
(RefSeq) uncharacterized protein LOC109838298
KO
K13095
splicing factor 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109838298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109838298
Spliceosome [BR:
aof03041
]
Complex A
Other components
Complex A specific factors
109838298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
RRM_1
KH_1
Extensin_1
SF1-HH
KH_12
Motif
Other DBs
NCBI-GeneID:
109838298
NCBI-ProteinID:
XP_020262340
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All DBs
Position
4:complement(19684277..19686427)
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AA seq
716 aa
AA seq
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MERNLCLVVHGETRSNNGNRNVGIMDESEEEPSEEPHEEEPCEEEPYEEEPSEEEPYEQD
PRDEEPYEQDPSEEEPSEEEPYEQDPSEEEPFEEEPYEEDPSEDKPNEEETYEDNPSQEE
PFEEEACQTESDDEPYEKALAKDEPSEGQLACRSYNRDSDKDSAQSSSNNLLGKSRNLSS
SLIISEKEETARISHKRKLSKWDAVPGDSGSTDDCVHVDIQKKNTISKMPGAIKLPDFLF
DPEFQNLHKQASKITERLLDREVIDDRQKHERSPSPPPGFEILKESKLRQKLMMQRQTIL
SELVQNFPGFKPPPYYIRPKLQKKIYIPEKEYPGYNFIGLIIGPQGITQKRMQKETGANI
TIRGKGFMRKDKLSNPDPSDNEDTHVFIEAESQASLDAAANMVEKLLIPVQEEYNVHKLT
QLRELAEKNQIVTGNNSIHQQSNFSQAYQPTSINNPISNSMELQKQIDYSNPYAAYLPQS
AMANPVTHSMKPQKQIDYSNLYVAHLPQSVDECKLSQLFLPFGEICSSIIRRDKITGISK
GYGFVKYKDPANAAMAISYMNGYQIDGHALAVRVAGIPPSVTNSSMGFQSIFQLPNFIYP
APTVQYDAGSMYWPNNSVATNIDPFSGYFSASLNSTGHYLLASSMIYGYPASNETAQFSS
SAMTFGSQPQLYHQSMPLNSQSFSHAHPVQISGSFDMPPPSDLTKDSTKDHQASSI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaatctgtgcttggttgttcatggtgaaactaggagtaataatgggaacagg
aacgtggggatcatggatgaaagtgaagaagaaccatctgaagagccacacgaagaagaa
ccatgtgaagaagagccatatgaagaagaaccaagtgaagaagagccatatgagcaagat
ccgagggacgaagagccatatgagcaagatccgagtgaggaagagccatctgaagaagag
ccatatgagcaagatccgagtgaggaagaaccatttgaagaagagccatatgaggaagat
ccgagtgaagacaaaccaaatgaagaagaaacatacgaggacaatccaagtcaggaagag
ccatttgaagaagaagcatgccagacagaatctgatgatgaaccatacgagaaagcacta
gcaaaagatgagccatcagaaggacagttagcatgtcggtcttacaacagagacagcgat
aaagactcagctcaatctagcagtaacaaccttttgggaaaatctcgaaacttatctagt
agcttgattatttctgagaaagaggagactgcaaggatttctcataaaaggaagctgagt
aaatgggatgcggtgccaggagattccggctctacagacgattgtgttcatgtggatatt
caaaaaaagaacactatatctaaaatgcctggagcgattaagcttcctgattttcttttt
gatccggaatttcagaatttgcacaaacaggcttcgaagattactgaaaggctgctggac
agagaggttattgatgatcggcagaaacatgaaagatccccctctccaccaccagggttt
gagattttaaaggagtctaagctccgtcaaaagctcatgatgcagcggcaaacaattctt
tcagaattagttcaaaattttcctggttttaagcctcctccttattacataagaccaaag
ttacagaagaagatctacataccagagaaggaatatcccggttataatttcattggcctt
ataattgggccgcaagggatcacacagaaaaggatgcagaaagagacaggtgctaacatt
acaatacgaggcaaaggtttcatgcgaaaggacaagctatctaatcctgacccttctgac
aatgaggatacacatgtctttatagaggcagagagccaagcttctttggatgcagctgca
aatatggtagaaaagcttctgatcccagtgcaagaggagtacaatgtgcataagctcacc
caactaagagagctagctgagaaaaatcaaatagttacaggaaataattcaattcatcaa
caatccaacttttctcaggcataccagccaacttcaattaacaatccaatatctaacagc
atggagctccagaaacagattgattattctaatccatatgctgcttatcttccacaatct
gcaatggccaatccagtaactcacagtatgaagccacagaaacaaattgattattccaat
ttatatgttgctcatcttccacaatctgtggatgagtgtaagctaagtcagctgttttta
cctttcggagagatctgttcatcaataattaggagggataagatcacaggcatcagcaaa
ggatatggtttcgtgaagtacaaagatcctgctaatgctgctatggctatatcatatatg
aacgggtatcagattgatggccacgcattagctgttcgagtagcaggcattcctccatct
gttaccaacagtagcatgggtttccaaagcatatttcagctcccaaattttatatatcct
gcgcccactgttcagtacgatgctggttcaatgtattggcctaacaacagtgttgcaacg
aatattgatccttttagtggatatttctcagcatctcttaattcaacaggccattatttg
ctggcatcttccatgatttatgggtatccagcatcaaatgaaactgctcagttttcaagc
tctgcaatgacttttggctctcaacctcagttgtaccatcaatccatgccattaaacagt
caatcattttcacatgctcaccctgtgcagatttcaggcagctttgatatgcctccacct
tcagatttgacaaaagattctacaaaagatcaccaggcatctagtatttag
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