Asparagus officinalis (garden asparagus): 109838552
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Entry
109838552 CDS
T05243
Name
(RefSeq) serine/arginine repetitive matrix protein 2-like
Organism
aof
Asparagus officinalis (garden asparagus)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAR1
Motif
Other DBs
NCBI-GeneID:
109838552
NCBI-ProteinID:
XP_020262581
LinkDB
All DBs
Position
1:103822284..103862502
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AA seq
3263 aa
AA seq
DB search
MAEPGDSSEDVHGDSFNNNDFMPFPTTMPVSRMQNGEKPCLGMKFSSHEEAYNYYNSYAL
MMGFGIRKSSVNYSQKDKQVLNRKFVCDKEGYRSNKDKRDIGKYINHRRETRVGCKAMMR
IKLLEDKTWEVVGFIEDHTNHMLSSPDKAKMHRSQQQFHRSKRCKKIIQCLQEEGITPST
ISRVINATSGREDESVTPQQCIDYMKTQRHNNIGLTSELPPKPPSKSGRRTPSPNSRRSS
SWPPSKLRRRGSGSDPPPTKSNRSHVGAPAEAPLEVRSSNPLPQLSTLKLVAPIEAPTPR
IWFRSPADQVSRRSSRRSPPRSPVVEPPPPTLDAQARGPHRSSDAEDLVPIPRRPSLTGL
TSELPPKPPSKSGRRTPSPNSRRSSSWPPSKLRRRGSGSDPPPTKSNRSHVGAPAEAPLE
VRSSNPLPQLSTLKLVAPIEAPTPRIWFRSPADQVSRRSSRRSPPRSPVVEPPPPTLDAQ
ARGPHRSSDAEDLVPIPRRPSLTGLTSELPPKPPSKSGRRTPSPNSRRSSSWPPSKLRRR
GSGSDPPPTKSNRSHVGAPAEAPLEVRSSNPLPQLSTLKLVAPIEAPTPRIWFRSPADQV
SRRSSRRSPPRSPVVEPPPPTLDAQARGPHRSSDAEDLVPIPRRPSLTGLTSELPPKPPS
KSGRRTPSPNSRRSSSWPPSKLRRRGSGSDPPPTKSNRSHVGAPAEAPLEVRSSNPLPQL
STLKLVAPIEAPTPRIWFRSPADQVSRRSSRRSPPRSPVVEPPPPTLDAQARGPHRSSDA
EDLVPIPRRPSLTGLTSELPPKPPSKSGRRTPSPNSRRSSSWPPSKLRRRGSGSDPPPTK
SNRSHVGAPAEAPLEVRSSNPLPQLSTLKLVAPIEAPTPRIWFRSPADQVSRRSSRRSPP
RSPVVEPPPPTLDAQARGPHRSSDAEDLVPIPRRPSLTGLTSELPPKPPSKSGRRTPSPN
SRRSSSWPPSKLRRRGSGSDPPPTKSNRSHVGAPAEAPLEVRSSNPLPQLSTLKLVAPIE
APTPRIWFRSPADQVSRRSSRRSPPRSPVVEPPPPTLDAQARGPHRSSDAEDLVPIPRRP
SLTGLTSELPPKPPSKSGRRTPSPNSRRSSSWPPSKLRRRGSGSDPPPTKSNRSHVGAPA
EAPLEVRSSNPLPQLSTLKLVAPIEAPTPRIWFRSPADQVSRRSSRRSPPRSPVVEPPPP
TLDAQARGPHRSSDAEDLVPIPRRPSLTGLTSELPPKPPSKSGRRTPSPNSRRSSSWPPS
KLRRRGSGSDPPPTKSNRSHVGAPAEAPLEVRSSNPLPQLSTLKLVAPIEAPTPRIWFRS
PADQVSRRSSRRSPPRSPVVEPPPPTLDAQARGPHRSSDAEDLVPIPRRPSLTGLTSELP
PKPPSKSGRRTPSPNSRRSSSWPPSKLRRRGSGSDPPPTKSNRSHVGAPAEAPLEVRSSN
PLPQLSTLKLVAPIEAPTPRIWFRSPADQVSRRSSRRSPPRSPVVEPPPPTLDAQARGPH
RSSDAEDLVPIPRRPSLTGLTSELPPKPPSKSGRRTPSPNSRRSSSWPPSKLRRRGSGSD
PPPTKSNRSHVGAPAEAPLEVRSSNPLPQLSTLKLVAPIEAPTPRIWFRSPADQVSRRSS
RRSPPRSPVVEPPPPTLDAQARGPHRSSDAEDLVPIPRRPSLTGLTSELPPKPPSKSGRR
TPSPNSRRSSSWPPSKLRRRGSGSDPPPTKSNRSHVGAPAEAPLEVRSSNPLPQLSTLKL
VAPIEAPTPRIWFRSPADQVSRRSSRRSPPRSPVVEPPPPTLDAQARGPHRSSDAEDLVP
IPRRPSLTGLTSELPPKPPSKSGRRTPSPNSRRSSSWPPSKLRRRGSGSDPPPTKSNRSH
VGAPAEAPLEVRSSNPLPQLSTLKLVAPIEAPTPRIWFRSPADQVSRRSSRRSPPRSPVV
EPPPPTLDAQARGPHRSSDAEDLVPIPRRPSLTGLTSELPPKPPSKSGRRTPSPNSRRSS
SWPPSKLRRRGSGSDPPPTKSNRSHVGAPAEAPLEVRSSNPLPQLSTLKLVAPIEAPTPR
IWFRSPADQVSRRSSRRSPPRSPVVEPPPPTLDAQARGPHRSSDAEDLVPIPRRPSLTGL
TSELPPKPPSKSGRRTPSPNSRRSSSWPPSKLRRRGSGSDPPPTKSNRSHVGAPAEAPLE
VRSSNPLPQLSTLKLVAPIEAPTPRIWFRSPADQVSRRSSRRSPPRSPVVEPPPPTLDAQ
ARGPHRSSDAEDLVPIPRRPSLTGLTSELPPKPPSKSGRRTPSPNSRRSSSWPPSKLRRR
GSGSDPPPTKSNRSHVGAPAEAPLEVRSSNPLPQLSTLKLVAPIEAPTPRIWFRSPADQV
SRRSSRRSPPRSPVVEPPPPTLDAQARGPHRSSDAEDLVPIPRRPSLTGLTSELPPKPPS
KSGRRTPSPNSRRSSSWPPSKLRRRGSGSDPPPTKSNRSHVGAPAEAPLEVRSSNPLPQL
STLKLVAPIEAPTPRIWFRSPADQVSRRSSRRSPPRSPVVEPPPPTLDAQARGPHRSSDA
EDLVPIPRRPSLTGLTSELPPKPPSKSGRRTPSPNSRRSSSWPPSKLRRRGSGSDPPPTK
SNRSHVGAPAEAPLEVRSSNPLPQLSTLKLVAPIEAPTPRIWFRSPADQVSRRSSRRSPP
RSPVVEPPPPTLDAQARGPHRSSDAEDLVPIPRRPSLTGLTSELPPKPPSKSGRRTPSPN
SRRSSSWPPSKLRRRGSGSDPPPTKSNRSHVGAPAEAPLEVRSSNPLPQLSTLKLVAPIE
APTPRIWFRSPADQVSRRSSRRSPPRSPVVEPPPPTLDAQARGPHRSSDAEDLVPIPRRP
SLTGLTSELPPKPPSKSGRRTPSPNSRRSSSWPPSKLRRRGSGSDPPPTKSNSKCHRNRP
LSGNNDLKGSKKTSEPKFPKEYSFKEYEVPAIFKYLLNNNKIKFPSISNKEEAKRTTEPK
YYAFHKRVHHPIKICYTLKDKIQALIDVSIITTKQPKEKKVGANVVSISFGFDPPSWFQP
ESVLKICSKMNNGWGPHPRRSPRVKAKPAALPQQSLRKMMKPRRGVKKEIVFGKGEKSPP
SNLFSKEDSNDEKPGPHLFKYGPKACNLMEKWGYDFTLGKGFCFGRGPRVPTKVACVPKG
KPDNYYGHRRGLDSDVSLGEVFKGLMSNMATVDPITMEEDDQLPTGEDPWIHHLNIQYGD
RFDQREPPTEDKVVQVNMDDEANPNLIFVSLPPDEKEELIALIREYIDVFAQNYENMLGL
DLNVAVHRLNIKPYAKPIKQQQR
NT seq
9792 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctggtgatagtagcgaagatgttcatggtgatagtttcaacaataacgat
ttcatgccttttccaacaacgatgcctgtttcaagaatgcaaaatggtgaaaaaccgtgt
ttaggaatgaagtttagtagtcatgaagaggcctacaactattataactcgtatgctttg
atgatgggatttggaatcagaaaaagctcagtgaattactcccagaaagataaacaagtg
ttgaatagaaaatttgtttgtgacaaagaaggttatagatctaataaagacaagagagat
atagggaaatatatcaatcatcggcgagagaccagagttggctgtaaagcaatgatgaga
ataaaattattggaggataaaacatgggaagttgtaggttttattgaagatcatacaaac
cacatgctcagtagtccagataaagcaaagatgcacaggtcacaacaacaatttcataga
agtaaaaggtgtaaaaaaattattcaatgtttgcaagaagaaggtattactccttccact
atttctcgtgttattaacgcgacaagtggaagagaagatgaatcagtgacaccacaacaa
tgcattgactatatgaaaactcaaaggcataacaatattggtctcacgtcggagctcccg
ccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagc
tcgtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgaccaag
tctaacaggtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaac
cccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgccgagg
atctggttccgatcccccgccgaccaagtctcacgtcggagctcccgccgaagcccccct
cgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccat
cgaagctccgacgccgaggatctggttccgatcccccgccgaccaagtctaacaggtctc
acgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaac
tctcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccgat
cccccgccgaccaagtctaacaggtctcacgtcggagctcccgccgaagcccccctcgaa
gtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccatcgaa
gctccgacgccgaggatctggttccgatcccccgccgaccaagtctcacgtcggagctcc
cgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaa
gctcgtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgacca
agtctaacaggtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcga
accccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgccga
ggatctggttccgatcccccgccgaccaagtctaacaggtctcacgtcggagctcccgcc
gaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctc
gtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgaccaagtc
tcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctccccca
actctcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccg
atcccccgccgaccaagtctaacaggtctcacgtcggagctcccgccgaagcccccctcg
aagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccatcg
aagctccgacgccgaggatctggttccgatcccccgccgaccaagtctaacaggtctcac
gtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactc
tcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccgatcc
cccgccgaccaagtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtc
gaaccccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgcc
gaggatctggttccgatcccccgccgaccaagtctaacaggtctcacgtcggagctcccg
ccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagc
tcgtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgaccaag
tctaacaggtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaac
cccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgccgagg
atctggttccgatcccccgccgaccaagtctcacgtcggagctcccgccgaagcccccct
cgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccat
cgaagctccgacgccgaggatctggttccgatcccccgccgaccaagtctaacaggtctc
acgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaac
tctcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccgat
cccccgccgaccaagtctaacaggtctcacgtcggagctcccgccgaagcccccctcgaa
gtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccatcgaa
gctccgacgccgaggatctggttccgatcccccgccgaccaagtctcacgtcggagctcc
cgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaa
gctcgtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgacca
agtctaacaggtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcga
accccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgccga
ggatctggttccgatcccccgccgaccaagtctaacaggtctcacgtcggagctcccgcc
gaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctc
gtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgaccaagtc
tcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctccccca
actctcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccg
atcccccgccgaccaagtctaacaggtctcacgtcggagctcccgccgaagcccccctcg
aagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccatcg
aagctccgacgccgaggatctggttccgatcccccgccgaccaagtctaacaggtctcac
gtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactc
tcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccgatcc
cccgccgaccaagtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtc
gaaccccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgcc
gaggatctggttccgatcccccgccgaccaagtctaacaggtctcacgtcggagctcccg
ccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagc
tcgtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgaccaag
tctaacaggtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaac
cccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgccgagg
atctggttccgatcccccgccgaccaagtctcacgtcggagctcccgccgaagcccccct
cgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccat
cgaagctccgacgccgaggatctggttccgatcccccgccgaccaagtctaacaggtctc
acgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaac
tctcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccgat
cccccgccgaccaagtctaacaggtctcacgtcggagctcccgccgaagcccccctcgaa
gtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccatcgaa
gctccgacgccgaggatctggttccgatcccccgccgaccaagtctcacgtcggagctcc
cgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaa
gctcgtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgacca
agtctaacaggtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcga
accccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgccga
ggatctggttccgatcccccgccgaccaagtctaacaggtctcacgtcggagctcccgcc
gaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctc
gtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgaccaagtc
tcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctccccca
actctcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccg
atcccccgccgaccaagtctaacaggtctcacgtcggagctcccgccgaagcccccctcg
aagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccatcg
aagctccgacgccgaggatctggttccgatcccccgccgaccaagtctaacaggtctcac
gtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactc
tcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccgatcc
cccgccgaccaagtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtc
gaaccccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgcc
gaggatctggttccgatcccccgccgaccaagtctaacaggtctcacgtcggagctcccg
ccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagc
tcgtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgaccaag
tctaacaggtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaac
cccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgccgagg
atctggttccgatcccccgccgaccaagtctcacgtcggagctcccgccgaagcccccct
cgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccat
cgaagctccgacgccgaggatctggttccgatcccccgccgaccaagtctaacaggtctc
acgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaac
tctcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccgat
cccccgccgaccaagtctaacaggtctcacgtcggagctcccgccgaagcccccctcgaa
gtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccatcgaa
gctccgacgccgaggatctggttccgatcccccgccgaccaagtctcacgtcggagctcc
cgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaa
gctcgtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgacca
agtctaacaggtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcga
accccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgccga
ggatctggttccgatcccccgccgaccaagtctaacaggtctcacgtcggagctcccgcc
gaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctc
gtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgaccaagtc
tcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctccccca
actctcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccg
atcccccgccgaccaagtctaacaggtctcacgtcggagctcccgccgaagcccccctcg
aagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccatcg
aagctccgacgccgaggatctggttccgatcccccgccgaccaagtctaacaggtctcac
gtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactc
tcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccgatcc
cccgccgaccaagtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtc
gaaccccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgcc
gaggatctggttccgatcccccgccgaccaagtctaacaggtctcacgtcggagctcccg
ccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagc
tcgtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgaccaag
tctaacaggtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaac
cccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgccgagg
atctggttccgatcccccgccgaccaagtctcacgtcggagctcccgccgaagcccccct
cgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccat
cgaagctccgacgccgaggatctggttccgatcccccgccgaccaagtctaacaggtctc
acgtcggagctcccgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaac
tctcgacgctcaagctcgtggcccccatcgaagctccgacgccgaggatctggttccgat
cccccgccgaccaagtctaacaggtctcacgtcggagctcccgccgaagcccccctcgaa
gtccggtcgtcgaaccccctcccccaactctcgacgctcaagctcgtggcccccatcgaa
gctccgacgccgaggatctggttccgatcccccgccgaccaagtctcacgtcggagctcc
cgccgaagcccccctcgaagtccggtcgtcgaaccccctcccccaactctcgacgctcaa
gctcgtggcccccatcgaagctccgacgccgaggatctggttccgatcccccgccgacca
agtctaacaggtctcacgtcggagctcccgccgaagcccccctcgaagtccggtcgtcga
accccctcccccaactctcgacgctcaagctcgtggcccccatcgaagctccgacgccga
ggatctggttccgatcccccgccgaccaagtctaacagcaagtgccacagaaatcgccct
cttagtggcaacaacgacctcaaaggcagcaaaaagacttctgaaccaaaattcccgaaa
gaatactcctttaaggaatatgaagttcctgctatcttcaaatacctcctgaataacaac
aaaatcaaatttccttcaatctctaacaaggaggaagccaagaggacaacggaaccaaaa
tattatgcatttcacaagcgggtccatcatcccattaagatatgctacacccttaaggac
aagatccaagccttgatcgacgttagcatcatcactacaaagcagcccaaagagaagaag
gtgggcgcaaatgtggtttctatcagtttcggttttgaccctccgtcatggtttcagcca
gagtccgtgttaaagatttgctcaaagatgaacaatggatggggtcctcatccaagaaga
agtccaagagtaaaggcaaaacctgctgccctgccacagcaatccctaagaaagatgatg
aagccaaggcggggggtgaaaaaagagatagtcttcggcaaaggagaaaaatctccacca
tccaatctcttctcgaaggaagatagtaatgatgaaaaaccaggtcctcacttgttcaaa
tatggaccaaaagcatgtaacctcatggaaaaatggggatatgacttcacacttgggaag
ggtttttgtttcggccgaggtcctcgagttccgaccaaagtcgcttgtgtccctaaggga
aaacccgacaattattatggccacagaagaggcttggactctgacgtcagccttggagag
gtgttcaaagggctgatgtcaaacatggccacagtcgatcccatcacaatggaggaagac
gatcaactgccaactggggaagacccatggatccatcacttgaatattcagtatggggat
cggttcgaccaaagagaacctcctaccgaagacaaagtggtccaagtaaacatggatgac
gaagcgaatccgaatctaatattcgtcagtcttccaccagacgagaaggaagagttgatt
gccctcatcagggaatatatagatgttttcgcccagaattacgaaaatatgctaggactt
gatctaaatgtggcagttcatcgccttaatatcaaaccgtatgcaaaacctatcaagcaa
cagcaaagatag
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integrated database retrieval system
