Asparagus officinalis (garden asparagus): 109838827
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Entry
109838827 CDS
T05243
Name
(RefSeq) poly(U)-specific endoribonuclease-B isoform X1
KO
K14648
poly(U)-specific endoribonuclease [EC:3.1.-.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109838827
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Gene cluster
GFIT
Motif
Pfam:
XendoU
Motif
Other DBs
NCBI-GeneID:
109838827
NCBI-ProteinID:
XP_020262839
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Position
4:131214090..131218801
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AA seq
438 aa
AA seq
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MEDLVHGLINVALGRDGGRRDGDRAQDSPAIDQASRSTWAEVVSSGQDENEESFSGYSRK
EGGEGTTDGGWETVGHKKERHPSRRSEEGEGRSDEGWETVGHKKEHRPSRRSEEEEVGGG
WQTAGREKHHQKKIPVDNWHKYKQPPVEQEYIHEADHGLNIEPSREELAELSAACSKLWD
LDSNRLIPGKDYEIDCGEGKKVYQKEDVASESLFRWLNDDIFRRPTYGRFCSLLDNYNPN
EGYKEVVTPQEKHEQDAFIEEISRTAPIRYLHKYLVSNGIAPEDYKEFKRMMINLWFGLH
GRGGGSSCSSAFEHVFVGEIKGRGKNEVSGFHNWIQFYMEEAKGNVDYQGYVFPRRRGQC
PDSETQLLTLQFEWNGILKSVSSSFIGVSPEFEIALYTLCFFMGGEDNHILLGPYAVNIK
CYRLGNDRIGSVFPIAES
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaggatctagtccatggcttgatcaatgtagctttaggcagagatggaggtcgccgt
gatggcgacagagctcaggactcccctgccattgaccaggcctctagatccacttgggct
gaggtggtttccagtgggcaagatgaaaatgaggaaagctttagtggatattcgagaaag
gaaggaggtgaagggacaaccgatggaggttgggagactgttgggcacaagaaagagcgt
catccatcaagaagatctgaagagggtgaagggagaagtgatgaaggttgggagactgtt
ggtcacaagaaagagcaccgtccctcaagaagatctgaagaggaagaggttggtggaggt
tggcaaactgctgggcgcgaaaaacatcatcagaaaaagattcctgtagataactggcat
aagtacaaacagcctcctgtcgagcaagagtatatccacgaagctgatcatggtctgaac
atagaaccatcaagagaggagcttgctgagttgtctgcagcctgcagcaagctctgggac
cttgactcaaaccgcttgattcctggaaaagactatgaaattgactgtggtgaaggcaaa
aaagtctatcagaaagaagatgtggcatccgagagcctatttaggtggttgaatgatgac
atatttcggaggcctacttatggacgcttctgttctcttttggataattacaatccaaat
gaaggatataaagaagttgttactcctcaagagaagcatgagcaagatgcattcattgag
gaaatcagcagaactgctccgataagatatcttcataagtatctagtttctaatggcatt
gcacctgaggattataaagagtttaagagaatgatgataaatttgtggttcggtttacat
gggaggggtggtggatctagttgctcttctgcttttgagcatgtttttgtaggagagatc
aaagggcgcgggaagaatgaagtctcaggcttccacaattggattcagttttacatggaa
gaagctaaaggaaatgtagactaccaaggttatgtattcccaaggagacgtggacaatgt
cctgactctgaaactcaattgctcacgcttcagtttgaatggaatggcatcctaaaatct
gtctccagcagttttattggagtgagcccagagtttgaaatcgccctttatactctctgc
ttttttatgggtggagaagacaaccatattcttctgggtccttatgctgtcaatattaag
tgttatcgtctaggaaatgacaggataggatctgtatttccaatagctgaatcttaa
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