KEGG   Asparagus officinalis (garden asparagus): 109838837
Entry
109838837         CDS       T05243                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109838837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109838837
   03041 Spliceosome [BR:aof03041]
    109838837
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109838837
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109838837
Spliceosome [BR:aof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109838837
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 BRAP2
Other DBs
NCBI-GeneID: 109838837
NCBI-ProteinID: XP_020262854
LinkDB
Position
4:66193438..66200038
AA seq 429 aa
MDSKENNTSSEVEMKIEEEQAAAAEEAAADGEAAEAEEETKEEGKESEMKEEEEAQNNGE
GDNEAPSASNKPSIEGASPGKIFVGGLPKDTTDEAFKGHFERYGKIVDSVIMKHRGTGHP
RGFGFITYEDPSVVDAVITDTHKFEGKQVEIKRTIPKGAISGKDFKTKKIFVGGIPTSIN
EDEFRNFFSKFGEIEEHQIMRDHTSGRSRGFGFIAFNSEKAVDELLTKGNRIEFAGAQVE
IKKAEPKKPGSAPAPPPPTKHYSNSRPGFGRGFKDQHYGGAAGRGAESGAYRYGRGSGSR
ARGYGGYGVSEFDGGYGGYGSMPIGSYRSESSVGFSGRYGGGLGRGYGLGGYDGPSESYG
RYGGATGYGRGYDSGAGVGGYDSSAGFGAYDSGAGVGSYGGVGGYGGTGTGLYGYSCTPE
HSHFKGRFS
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggactcgaaagaaaacaacacctcatcagaagtagagatgaagatcgaagaagaacaa
gcggcggcggcggaggaggcggcggccgacggagaagcggcggaggccgaagaagaaacg
aaggaagaggggaaagaatccgagatgaaagaagaggaagaagctcagaacaatggggag
ggggataatgaagctccctcagcctctaataagccttcgatcgaaggcgctagccccggg
aagattttcgttggggggctgcccaaagatactaccgatgaggctttcaagggtcatttt
gagaggtacgggaagatagtggattcggtgataatgaagcatcgagggacggggcatccc
cgtgggttcggattcattacttacgaagacccgtctgtagttgatgcagtcattacggac
actcacaaattcgagggaaagcaggtggaaatcaagagaacgatacccaaaggagcaata
tctggaaaggatttcaagaccaagaagatttttgttggtggcatcccgacatcaataaat
gaggatgaatttaggaatttcttttcaaaatttggtgaaattgaagagcatcagatcatg
cgggatcatacttcaggccgttcccgtggttttggttttatcgcatttaatagtgaaaag
gctgtcgatgagctcttgactaagggcaacaggattgagtttgctggagcccaggtagaa
atcaagaaagctgaaccaaagaagcctggaagtgcacctgcaccacccccacccacgaag
cactatagcaattctagacctggttttgggagagggtttaaagatcagcattatggcggt
gctgcaggtcgcggcgctgagtctggtgcttacaggtatggaagaggttctggaagtaga
gcgaggggttacggtggatatggtgtgagtgagttcgatggtggatatggagggtatgga
agcatgcctataggatcttatcgaagtgagtcttctgtagggttttctggtcgttatgga
gggggccttggtagaggttacggtttaggtggttatgatggaccatctgaaagctatggg
agatatggtggtgctactggttatggtagaggttatgattcgggcgctggcgttggtggc
tatgattctagcgctggctttggtgcttatgattctggcgctggagttggcagttatgga
ggtgttggtggttatgggggaacaggcacaggtctgtatgggtattcatgtacacctgag
cattcacattttaaagggcggttttcttga

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