Asparagus officinalis (garden asparagus): 109838895
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Entry
109838895 CDS
T05243
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109838895
Enzymes [BR:
aof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
109838895
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109838895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
DUF938
Motif
Other DBs
NCBI-GeneID:
109838895
NCBI-ProteinID:
XP_020262913
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All DBs
Position
4:complement(70893656..70897966)
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AA seq
327 aa
AA seq
DB search
MSLVHVRGRPDQLSRSTGQSEDFFSVESDESDLEAKSRAIDEDKAKVEEEAEEELRLNIK
EEFDEFRLPTEEDKAKVEEEAEEELRLNIKEEFDEFRLPTEEELEEEAHQPPNLSKLQRR
IKEIVNVLSNFKKLRHDGASQKDYVEQLKVDLGSYYGYNDFLIGALVEMFPAAELVELLE
AMEKSRPECLRTNTLKTRRRDLAGVLINRGVNLDPIGKWSKVGLVVYESQVPIGATPEYM
AGHYMLQGASSFIPVMALAPQEKERIVDMASAPGGKTTYIAALMKNTGIIYANEFKEPRL
KSLTANIHRMGVTNTVICNYDGKEVSC
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggtgcacgttcgcggtcgacctgatcagctctcgcggtcgaccggacagagt
gaggatttcttttcagtggaatcggatgagagcgatttagaggccaagtctcgagcgatt
gacgaggacaaggcgaaagtggaagaggaagcggaggaggaattgaggttgaatataaag
gaagagtttgacgagttcagattgcctacagaagaggacaaggcgaaagtggaagaggaa
gcggaggaggaattgaggttgaatataaaggaagagtttgacgagttcagattgcctaca
gaagaggaactcgaagaagaggcacatcaacctccgaacctctcaaaactccagcgcaga
ataaaagagattgttaatgtgctctcaaatttcaaaaaattgagacatgatggtgcttca
cagaaggattacgtggagcagctaaaggtggacctgggttcttattatggctacaatgat
tttctcattggggctcttgttgagatgtttccagctgcggagcttgttgaactcctggaa
gctatggagaagagtcgacctgaatgcttgcgaacaaacactttaaagactcggagaagg
gatctggctggcgtcctgataaatagaggagttaaccttgatcctataggcaagtggtca
aaggttgggttagtggtgtatgagtcccaagttcctattggtgcaacccctgagtatatg
gctgggcattacatgctgcaaggtgcaagctctttcatacctgtgatggcacttgctccg
caggagaaggagcggattgtcgatatggcgtctgctccaggtggaaaaacgacatatatc
gctgctcttatgaaaaatactggtataatttatgcaaatgaatttaaggaaccaaggctc
aagtcactaactgcaaatattcatcggatgggcgtgacaaatactgtaatatgcaactat
gatgggaaggaggtgagttgctaa
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integrated database retrieval system
