Asparagus officinalis (garden asparagus): 109838993
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Entry
109838993 CDS
T05243
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109838993
03012 Translation factors [BR:
aof03012
]
109838993
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109838993
mRNA cycle factors
Stress granule specific factors
109838993
Translation factors [BR:
aof03012
]
Eukaryotic type
Initiation factors
eIF-4
109838993
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
DUF7342
Motif
Other DBs
NCBI-GeneID:
109838993
NCBI-ProteinID:
XP_020263011
LinkDB
All DBs
Position
4
Genome browser
AA seq
1690 aa
AA seq
DB search
MSQNQTRGRSSNPRGFSGGRGRGRAQPPVSSNSSASRSLKKSGNGQSRATPIGTNQVPVS
SQGSSELRTSNAGSRPIPKAPSSQPSHSATPPKGGASRESFPLQFGSISPGIMNKMQIPA
RTSSAPPNLDEQKNAQAHHDSFRTKSTMPPPTALKEQQQQMRNDVTGLNQSSTRDSHPQS
QTNRDVHVPISLAPASIPPKSSVLPIGGMPMHLPFQQPQVPIQFGGPSPQMQPQGVTFNS
LQMPMALPIAQAPQQFFVPSIPSHPLQQPTMMHQGQGLGFAHQIGHQMPSQLGNLGFGIG
PQFSQPQPVTFVGTRRSTVKITHPDTHEELKLDMHKESKASNQKLQAVLTFSSSHQTNYH
STMQANSYNPSPILNPTSNSQMTTGSQGPRYRTPVGQNGQTILFSKQSVHNPISGNKPEQ
SLQVSAPPSVRVTIRPAVNSFEEKTGSIHQSKLQTQKEGGEVDQQPKSIEIASDTFSAED
EHSTTAPSSRISSSHLTPVGDSIQRSDSIKEQEGRTSKRAYHQQQNKPDVLDSEGMTKTI
SKSIKDSSDMIAQEKLEFLSLSNSSASITGLPFPAVQHENSAESKIKAVPSLSESYRVTL
EKEVSGDSSICSAVSLELATNRYLSEEGDSHEASTSLDSKAGRTISEISDSASNLHENTS
AETEKAHEDLALNGKSEVSADLQDSTSAGSYPVSTAPDSLETVNTTATRENEEIVVDKPE
EKASHVLCHGEEQPGTGQVVHCRLEVEMGEKKTDVLSSFSESKHTGYPLSSSHAAEDKPS
GPDSILNKFETESSQDSLQGSVSLGHKHKLDGEVTESSSREGLKDKPNLDPVRSKVNAGK
KKKLKDILSRADAAGSSDLYNAYKGPEEKNSVVDTSESIDDSLTVDAKNVLADDHNEDVL
DVEVGQITSEIDDWEDAADVSSPDLAVENIQQAHKNETTSKKSYTIDFLLTFSEQSADLP
VGFEIESDIANALMVSPVRTYPSPGRILDRSPYHGNDEKWTKAATGFGIGHDIRLNMGYA
VANISSRPAQGVNNLAVRHSRAHPSTHFASGILPGPMQPLSNADSDRWQRAIGAQRGFIP
SPHAPSQIMHKAANKYEIGKVSDIEQAKQRQLKAILNKLTPQNFEKLFLQVKEVNIDNTV
TLTGVISQIFDKALSEPTFCEMYANFCACLSNELPDFVEDNEKITFKRLLLNKCQEEFER
GEREEEAGRIEKEGESKQTAAQREEKRIKARRRMLGNIRLIGELYKKRMLTERIMHACIQ
KLLGEYQDPDEEDLESLCKLMSTIGAMIDHAKAKEHMDAYFDRISKLSTHPKLLPRTRFL
LRDTIDLRKNNWKERRKVEGPKKIDEVHRDAAHERQAQAGRLARGPVITSGPRRGPPADY
NLRGSALLSSPNSQQIGAARGLPTQFRGYTNQDTRADDRNHFESRVLSVPLPKRTTDDNS
ITLGPQGGLARGMSIRGESMLRDFRIDVNDKSASTNPSGRIHGSSSGIVETPSQSKFLSE
EDLREKSVSAIREFYSAKDEEEVALCIKELNSPSFYSSMISLWIADSFERKETERDLLAK
LLISLCKHQNSLFSHFQLIQGFEYVLSSLEDAVNDAPKAPEFLGHIFAKIALEDVVSLRD
IGKIIYEGGEEPGSLLESGLASEVLGCVLEFIKMAKGDSMLREICLNSNLKLEDFIPRHP
TKNNKLAAFL
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaaatcaaaccagaggccgatcgagcaatccgaggggattctccggcggaaga
ggccgagggcgcgctcagcctccagtctcatcaaattcatcagcgtctcggagtctcaag
aaatcaggcaatggacaatcgagggcaactcccattggcacgaatcaagtaccagtatct
tcacaaggatcatcggagttgcgcacctcaaatgcaggttcgagaccgattccgaaggct
ccatcttctcagccttctcactcagcaactccacctaaagggggtgcatcgcgagaatca
tttcctcttcagtttgggagtataagtccagggatcatgaacaagatgcagatacctgct
cggacgagttctgccccgccgaatttggatgagcagaagaatgcacaggctcatcatgat
tcgttcaggaccaaatccacaatgcctccacccactgctctaaaagagcaacagcagcag
atgaggaatgatgtgactggccttaatcaatctagcactcgagattctcatcctcaatcc
cagacaaacagggatgtacatgttcccatttcattggctcctgcttcaataccaccaaaa
tcttctgttcttcctataggtgggatgccaatgcacctcccctttcaacagcctcaagtt
cccattcaatttggtggtccaagcccacaaatgcaaccacaaggtgtcacattcaattca
ctacaaatgccgatggcattacctattgcccaagctcctcagcagttttttgttcccagt
atcccgtctcatccactgcaacaaccgaccatgatgcatcaggggcagggcttaggcttt
gcacatcaaataggtcaccaaatgccttctcagttaggcaacctcgggtttgggattggc
ccacaattttctcagccacagcctgtaacttttgttggtacaaggaggagcaccgtgaag
ataactcatccagatacacatgaagagttgaagcttgatatgcataaagagagtaaggca
tccaatcaaaagctgcaagccgttctgacttttagttcctctcatcaaacaaactaccat
tctaccatgcaagctaattcttataacccttcaccaattttaaaccccacatctaattct
caaatgactacaggttcacaaggtccccgatatagaactcctgttggtcaaaatgggcaa
accattttgttcagtaagcaatctgtccataatcccatatcaggcaacaaacctgagcaa
tcattgcaagtttctgctcctccttctgtccgtgtgacaattagaccagctgtcaattca
tttgaggagaaaactggatcaatacaccaaagtaagttgcaaactcagaaagagggtggt
gaagttgatcagcagcccaaatcaattgaaatagcaagtgatactttttcagctgaagat
gaacattccaccacagcaccatcttctagaatatcttcatcacatttgactccagttgga
gattctattcagagatcagactccataaaggaacaggagggaagaactagtaaaagagca
tatcatcagcaacaaaataagccagatgtactagattctgaaggaatgacaaaaacaatc
tcgaagtcaatcaaagatagcagtgacatgattgctcaggagaagcttgagttcctttca
ctgtcaaattcttctgcttctatcactggtttgccttttccagctgtacaacatgaaaat
tctgcagaatccaagattaaagcagtgccttcactttccgagtcatatagagttacactg
gaaaaggaagtatcaggagattcttctatttgttctgctgtttcactggagttggcaacc
aaccgctatttgtctgaggagggagattcacatgaggcatcaacttctttggattctaag
gctgggagaactatatctgaaatttctgattccgcatcaaatttacatgagaatacatct
gctgaaactgaaaaagcacatgaagatttagctttgaatggcaaatctgaagtatctgct
gatttacaagatagcacaagtgctggatcatatccagtttccacagcacctgattctctt
gaaactgttaatacaactgcaactagggaaaatgaagaaattgtagttgataagcctgaa
gaaaaagctagtcatgtattatgtcatggtgaagagcagccagggactggacaggtggtg
cactgcaggctagaggttgaaatgggagaaaagaagacagatgttctttcttcattttct
gagtctaaacataccggatatcctttatcatcttctcatgccgctgaagataaaccttca
ggccctgatagtattttaaataaatttgaaacggaaagcagccaggattctctacaaggt
tcagtttccttggggcataaacataaattggacggtgaagttacagaatcgtccagtagg
gagggactcaaagacaagcctaatttggatcctgtaagaagtaaggttaatgctggaaaa
aagaagaaattaaaggacattctctctagggcagatgctgcagggagttcagacctttat
aatgcatacaagggcccagaggaaaaaaattcagtagttgatacatcagaaagcattgat
gattctttaacagttgatgcaaagaatgtgcttgcagatgaccataatgaagatgttctt
gatgtagaagttgggcagattacatctgagattgatgattgggaagatgccgctgatgtc
tcttctccagatttagcggtggagaacatacagcaggctcataaaaatgaaactactagt
aaaaagagctacaccatcgattttctgttgaccttttctgagcaatctgcagatcttcct
gtaggctttgagatagaatctgacatagcaaatgctttaatggttagtccagtcaggaca
tatcccagcccaggaagaatcctggatagatctccttatcatggaaatgatgagaagtgg
accaaagcagctactggttttggtattgggcatgacattcgattaaatatgggttatgcg
gttgccaatataagttctcgaccagctcaaggagttaataatctggctgtcaggcattca
cgtgctcatccatccactcactttgctagtgggattctccctgggcctatgcaacctctg
tctaatgctgattcagacaggtggcagcgtgctattggtgctcaaagaggttttatacct
tctcctcatgcaccgtctcaaataatgcataaggctgcaaataagtatgaaataggtaag
gtgtctgacatagaacaggcaaagcaaaggcagctgaaagctatacttaacaagttgaca
cctcagaattttgagaaactctttttacaagttaaagaggttaacatcgacaacacagtt
actcttactggggtcatttcccagatttttgataaagccttgtcggagccaaccttttgt
gagatgtatgcaaatttctgtgcctgcctttctaatgaattaccagatttcgtcgaggac
aatgaaaaaattacctttaaaaggttgcttctcaacaagtgccaagaagaatttgaaaga
ggtgagagagaggaggaagcgggcagaatagaaaaggaaggtgaaagcaaacaaactgca
gcacaaagagaagagaaacgaatcaaggcacgacgacggatgcttggaaatattcgtctg
ataggagaattatacaaaaagagaatgctgacagagaggatcatgcatgcatgtatacaa
aaattgctgggagaatatcaggatcctgatgaggaggatcttgaatctttgtgtaagttg
atgagcacaataggggccatgatagatcatgccaaggccaaggaacatatggatgcatat
tttgacaggatctcaaaactttctacccatccgaagctattacctcgaactagattcttg
ctaagggacacaattgatcttagaaagaataattggaaagagagaagaaaagttgaaggg
ccaaagaagattgatgaggttcacagagatgcagcacatgagcggcaagctcaagctggc
agattggctcgtggccctgtcattacttctggaccaagacgaggacctcctgctgattat
aacctgagaggatctgctttgctatcttctccaaattctcagcaaattggcgctgctcgt
ggtttacctactcagttccgtgggtataccaatcaagatactcgagcggatgacagaaat
cactttgagagtagggtgctatctgttcccctcccgaaaaggaccactgatgacaattcc
atcactttaggtcctcaaggtggtctagctcggggtatgtccattagaggagaaagcatg
ttaagggacttccggattgatgtgaatgataaatctgcatcaactaacccttctgggaga
atacatggatcttcaagtggaattgtagagacaccgtctcagtcaaaatttttatctgaa
gaagatttacgggagaagtccgtatctgccataagggagttctatagtgccaaagatgag
gaggaggtagctttatgcatcaaagagctcaattcccctagtttctactcttccatgata
tcactatggatcgcagactcctttgaaaggaaagaaacagaacgagatctcttggccaag
cttctcatcagcctttgcaaacatcaaaatagcttgttcagccattttcagctcatccag
gggttcgaatatgttctttcttcacttgaggatgccgttaatgatgctcccaaggctcca
gaattccttggtcacatatttgccaaaattgcactagaggatgtggtttctttaagagac
ataggaaaaataatatatgaagggggagaagagccagggagtttattggaatctgggctt
gcatcagaagtcctaggttgtgttttagaattcataaaaatggcgaagggggattcgatg
ttgagggagatatgtttaaattctaatcttaagctggaggatttcataccgaggcatccc
accaaaaataacaagcttgctgcatttctttag
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integrated database retrieval system
