Asparagus officinalis (garden asparagus): 109839016
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Entry
109839016 CDS
T05243
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109839016
Enzymes [BR:
aof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
109839016
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109839016
Prokaryotic type
109839016
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
109839016
NCBI-ProteinID:
XP_020263038
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Position
4:complement(86144875..86149138)
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AA seq
337 aa
AA seq
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KLKKQILGIRLFRKRKKGTRLKLEIGVSEKTELCSVKSELGFSGVPKEDEKTELVDFNSN
AEGRSEAEIGVSAVEVKSQFVDCEMTPCDSKISQEDEPSSRLDEEGSLLETSVLNKELGV
NVINGEQIVGLGGSKFEYGDEERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIISF
NADRVVSLEGIEFVRCEVVGQSFMLHQIRKMIGLAVAMMRNCCPESLMDMALRQDININV
PTAPEVGLYLDECFFTSYNQKWKDSHEALSMDAYAKQAEEFKLKYIFSHIASMEHKEGAV
ALWLHSLNHRNYPDFRFQESKGRSANGEHAKVDKMAD
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
aaattgaaaaagcagatcttggggattcgcttgtttcgaaagaggaagaaaggcacgagg
ttgaagctggaaatcggggtcagtgaaaaaactgagctttgtagtgtgaaatcagaactt
gggttttctggggttccaaaagaggatgaaaaaactgaacttgttgactttaactcgaat
gctgagggcagaagtgaagctgaaattggggtttcagctgtggaggtgaaaagtcaattt
gtggattgtgagatgacaccttgcgattctaagatctcgcaagaagatgaacctagtagt
agattagacgaagaaggatctttgttggagaccagtgttttgaacaaggaacttggtgtc
aatgtaattaatggggagcaaattgttgggttgggtggcagcaagtttgagtatggtgat
gaagagagggagaggtttaatggcattctaaagcgttatgtaggaactcacaacttccac
aatttcacgacaagaacaaaggcagaagacccatcagctcggagatacataatctccttc
aatgctgatcgtgttgttagtcttgaagggattgagtttgtgagatgtgaggttgttggc
cagagcttcatgcttcatcagatacggaagatgattggtctcgcagttgccatgatgagg
aattgctgcccagagtccttgatggatatggcgctaagacaggatataaatatcaatgtg
ccaacggcgccagaggttgggttgtatttagatgaatgtttcttcacttcttacaaccaa
aagtggaaggattcacatgaggcactctccatggatgcttatgctaaacaagctgaagaa
tttaagttgaaatatatattctctcacattgcgtctatggaacacaaagaaggagctgtt
gctctatggcttcattccttgaaccatcgtaattatcctgattttcgtttccaagagtca
aagggaaggtctgcaaacggtgaacatgccaaagttgataaaatggcagattaa
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