Asparagus officinalis (garden asparagus): 109839304
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Entry
109839304 CDS
T05243
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03013
Nucleocytoplasmic transport
aof03015
mRNA surveillance pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109839304
09122 Translation
03013 Nucleocytoplasmic transport
109839304
03015 mRNA surveillance pathway
109839304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109839304
03041 Spliceosome [BR:
aof03041
]
109839304
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109839304
Spliceosome [BR:
aof03041
]
Complex C
Other components
EJC/TREX
109839304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
109839304
NCBI-ProteinID:
XP_020263323
LinkDB
All DBs
Position
4:complement(134287604..134295885)
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AA seq
152 aa
AA seq
DB search
MAGSEQDEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAV
LRECQRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDP
EGLRIFYYLVQDLKCFVFSLISLHFKIKPIQS
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagcgagcaggacgagttctacctccggtactacgtaggccacaagggaaaa
ttcggccacgagttcttggagttcgagttcaggcccgatggcaagctccgctacgccaac
aactcgaactacaagaacgacaccatgatccgcaaggaggtcttcttgacccccgccgtc
ctccgagagtgccagcgcatcatctccgagagcgagataatgaaggaggacgataacaac
tggccggagccggatagggttgggaggcaggagctggagattgtgatggggaacgagcac
atctcgttcacgacgtcgaagattgggtcgctggttgatgtgcagagcagcaaggatcct
gaggggcttcgtatcttctattatctcgttcaggatttgaaatgctttgttttctctctc
atctcgctccatttcaagatcaagcctatccagtcgtag
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