KEGG   Asparagus officinalis (garden asparagus): 109839311
Entry
109839311         CDS       T05243                                 
Name
(RefSeq) DNA repair endonuclease UVH1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03420  Nucleotide excision repair
aof03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    109839311
   03460 Fanconi anemia pathway
    109839311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aof03032]
    109839311
   03400 DNA repair and recombination proteins [BR:aof03400]
    109839311
DNA replication proteins [BR:aof03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    109839311
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109839311
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 109839311
NCBI-ProteinID: XP_020263331
LinkDB
Position
4:complement(131467901..131490199)
AA seq 997 aa
MSSPSFVGTSNAFDTNTGVQEDNASVESENDDEEEGLQINNMTLIDRDEGANNHIDGCYA
NNDYVVLEDPPPDELQGEEWIDNSMMESVPIGTNSGHDTQGDDFSFVKGDLYENCEDKDL
GGHYDGNANCPWKLNSCSGVRPVPDITMIGHSQSHLAWVIEDARVRAFDSIEADIDAHVP
EIQHSVALGLLNRIKKTIAQLVTVRTLHPLCVEDLTVENGLFKSFDEIVRRQLDPIWHTI
GRKTKQLVSDLRTLRKLLDYLVRYDAVTYLKYLDTLRVSEGVRSVWMFAESSHKIFELAK
RRVYQVVRADGTRIASVAKNKKKRKMNDKSKKEKESENGVSSSNLLDPTVGVVLDEVLEE
APKWKVLRELLEEIEEERHKEALSRQEQNMVENVEDNTDIVLVACKDELSCLQLEDCISK
GPHKVMREEWEKYLLGKAELHSLRKRNKKRSQDPKGFGVLDGVATGPSENTEASSISKLE
NDALLAAASEISNLNKEEISVGHNSEPRTRRGNYGRGRGRGKSRNLTPSARVSENQRDKL
SEKENNKIDQGRGRGRGKSRESTERAQVAEKRSEKPSEKENNKIDQDGMETEGQHGEADI
RLGGSLEEATLANASDGKIVLQRNEPESSATESSDTKPLPPVQFYALERDQHILGLWKPS
VIIVYHPDMSFVREIEVYKAENPSKKLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQ
KSLMMIPVDQDGRCVGPTICEPQSLTSQNSLTRKAGGRKTVEKEMQVIVDMREFMSSLPN
VLHQKGMRVIPITLEVGDYVLSPLICVERKSIGDLFQSFASGRLYHQAEMMNRYYKIPVL
LIEFSQDRSFSFQSANDIGDDVTPTSIISKLSLLVLHFPRLRLVWSRSLHATAEIFASLK
ANQDEPDESKAIRVGVPSEDGIVENDVRAENYNTSAIEFLRRLPGVTDSNYRAIMDSCKN
LAELALLPVERLAELMGGQKAAKTLKEFLDAKCPTML
NT seq 2994 nt   +upstreamnt  +downstreamnt
atgagcagtccttcgtttgtgggcacttcgaatgctttcgatactaacacgggagttcaa
gaagataatgcaagcgttgaatctgagaatgatgatgaagaggagggcttacaaattaat
aacatgacattgatagatcgtgatgaaggggccaacaaccacattgacgggtgttatgct
aataatgactatgttgtcttagaggatccgccgcccgatgaacttcaaggagaagaatgg
attgataactccatgatggaaagtgttcctattggcactaatagcggtcatgatacacag
ggcgatgacttctcattcgtgaagggagatctttatgagaattgtgaagataaagatctt
ggtggacactacgacgggaatgcgaattgtccttggaagcttaattcatgttcgggtgta
agacccgtaccagacatcaccatgatcgggcattcccagagtcatttggcttgggtcatt
gaggatgcgagagtccgtgcttttgatagcattgaggctgatattgatgcgcacgtgcct
gagattcagcattcggtggcgttaggactcctcaacaggatcaagaagaccatagcgcag
ctcgtcaccgtgcgaactcttcacccgctgtgtgttgaggacttgacggtggagaatggg
ctgtttaagtcgtttgatgagattgtgaggcggcagcttgatccgatatggcatacgatt
gggaggaagacgaagcagctggttagtgatctgaggacgctgaggaagctgttggattat
cttgtgaggtatgatgctgtgacgtacttgaagtacttggatacactgagagtttcagag
ggcgttcgatcggtttggatgtttgcagagtcaagccacaagatcttcgagcttgcgaag
aggagggtttatcaggtggttcgggctgatggaacgagaattgcttcagttgctaagaac
aagaagaagaggaagatgaatgataaaagcaagaaagagaaagaaagtgaaaatggagtt
tcctcttctaatttgctggatcccactgtcggtgtggtgttagatgaagtcttggaagaa
gcacccaaatggaaggtcttacgcgagttgctggaagaaatagaagaagaacggcataag
gaagctttgtcaagacaagagcagaatatggttgaaaatgttgaggataatactgacatc
gttttggtagcttgtaaagatgaactctcatgtttgcagttggaagattgtatatcgaaa
ggcccacataaggtcatgcgggaagaatgggagaagtacttgttgggtaaggctgagttg
catagcttgcgtaaacgcaataagaaaagatctcaggatcctaagggcttcggggtactt
gatggagtagctactgggccttctgagaacacagaagctagcagcatatccaagctggaa
aatgatgccttactggctgcagcatcagagattagcaatttaaataaagaagaaatcagt
gtagggcacaattctgagccacgtacgaggagagggaactatggaagaggaagggggaga
ggaaagtccaggaatttaacaccaagtgctcgagtttctgaaaaccaaagggacaagcta
tcagaaaaagaaaataataaaattgatcaaggaagaggaagggggagaggaaaatccagg
gaatcaacagaaagggctcaagttgctgaaaagcgaagtgagaagccatcagaaaaagaa
aataataaaattgatcaagacggtatggaaacagaaggccaacatggggaagctgatata
agacttggaggcagtcttgaggaagcgaccttagcaaatgcatctgatggtaaaattgtt
cttcaaagaaatgagccagagtcttctgcaacagagtcaagtgatacaaaaccgcttcca
cctgttcagttttatgctctagaaagagatcagcacattcttggcctttggaagccatct
gtaattatcgtttatcatccagacatgagttttgttcgggaaattgaagtatacaaggct
gagaatccttcaaaaaagttgaaggtgtactttttgttttatgaagattctacagaggtg
caaaaatttgaagcaagcatacgtcgggaaaatggagcatttgaatctttgattaggcag
aaatccctgatgatgatccctgttgatcaggatgggcgttgtgttggacctactatttgt
gagccgcaatcacttacttcacagaactctctaactagaaaggcaggtggtagaaagaca
gtggagaaagaaatgcaggtcatagtggacatgagagagttcatgagcagtcttcctaat
gttctgcaccaaaaaggcatgcgagtcatacctattactttggaagttggcgattatgta
ctttcaccattaatttgtgttgaaagaaaaagtattggagatctatttcaaagttttgca
tcaggacgcctctaccatcaggcggagatgatgaaccgctattataaaatacctgtgctt
ttaattgagttctcacaggacaggagcttttccttccagtctgcaaatgatattggtgat
gatgttacgccaacaagcataatttcaaagctttcgttgcttgtcctacatttccctcgc
cttcggcttgtctggtctcgtagtttgcatgcaacagcagagatatttgcgtcactgaag
gcaaaccaggacgaacctgatgagagcaaggccataagagttggtgttccttcagaggat
ggcattgtggagaatgatgtcagggctgaaaattacaatacgtctgcaattgagttcttg
agacgtctccctggtgtaactgattcaaattaccgagcaataatggacagctgtaaaaac
ttggccgagcttgctcttcttcctgtagagagattagccgaattaatgggaggtcaaaaa
gcagcaaaaacattgaaggaatttcttgatgcaaaatgtccgacaatgttgtga

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