Asparagus officinalis (garden asparagus): 109839324
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Entry
109839324 CDS
T05243
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109839324
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109839324
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
MOEP19
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
109839324
NCBI-ProteinID:
XP_020263342
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Position
4:complement(132574117..132582299)
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AA seq
412 aa
AA seq
DB search
GGEIKKWPGWPGDNVFRLIVPVAKVGSIIGKKGELIKKICEETRAKIRVLDGVAGTADRV
VLIHGKEDPEADSSPAMNAVLKVFKRVSGVSDTGADGAPQESSTPATCSVRLLVPASQAI
NLIGKQGTSIKSFQVNSGAIIRVITGDELPFYVTEEERVVDIQGEPLKVLKALEVVVGHL
RKFLVDHSILPLFEKSPQPNASLVQAQAPVAAPWSDQAPSLIHTAQQSGMGSDYSFPLKR
DSLYLEHDSHLDSQIQRSGALSSLYRQEPPLSGLHSTGLGRSAAALVTQVVQTMQIPISY
AEDIIGIGGANIAYIRRTSGAVLTVQESGGLHDEITVEIKGSSTQVQAAQQLIQDFMSGH
KEPAVSGYGGLDTGLRSSSYSHLASSAYSSSSLASEYGGYGSGLGRYGDYRY
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
ggaggggagatcaagaagtggccggggtggccgggggacaacgtgttccgcttgatcgtg
ccggtggcgaaagtggggagcatcatcgggaagaagggggagcttatcaagaagatctgc
gaggagacgagagcgaagattagggttcttgacggcgtagccgggaccgcggatcgcgtt
gttctgattcatggaaaagaagatccagaagcagattcgtctcctgcaatgaatgctgtg
ctaaaagtattcaaacgtgttagtggtgtctcagatactggagctgacggtgcacctcaa
gaatcctccacccctgcaacatgttcagttcggttgttggtgccagcatctcaagctatt
aacttgattggaaaacaagggacttcaattaaatcgtttcaagtgaatagtggtgcgata
atacgagttattacaggagatgagctccccttttatgttaccgaggaagaaagagtagtc
gacattcaaggtgaacccttgaaggttcttaaggctcttgaagttgtggttggtcatttg
cggaaatttttggttgatcatagtattcttcccttatttgaaaaaagtccgcagcccaat
gcatcacttgttcaagctcaagctcctgtagcagctccttggagtgatcaagctccatca
ttgatacatactgctcagcagtctggcatgggcagtgattattcattcccattgaagcgt
gattctctgtatctggagcacgattctcatttagattcacaaatccaacgttcaggtgca
ctgtcgtcactttatcggcaggaacctcctctttctggactgcattccacaggattaggg
cggagtgctgccgctttagttactcaggttgtgcaaacaatgcagattccaatatcatat
gcagaggacatcatcggcatcggtggagcaaacattgcatacatccgtcgcacaagtgga
gctgtccttactgttcaggagagtggaggcttgcatgatgagatcacagttgagatcaaa
ggctcttctactcaagttcaggctgctcaacagctcattcaggattttatgtcgggacat
aaagaaccagcagttagcggttatggaggtctagatacgggactaaggtcatcatcatat
tctcatctagcaagttcagcatactcatcctcatccctcgcttcagaatatggtggatat
ggctctggattgggacgatacggtgactacagatattaa
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