Asparagus officinalis (garden asparagus): 109839338
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Entry
109839338 CDS
T05243
Name
(RefSeq) uncharacterized protein At3g06530
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109839338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109839338
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109839338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
ARM_At3g06530
BP28CT
U3snoRNP10
TOR1L1_N
HEAT
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
109839338
NCBI-ProteinID:
XP_020263356
LinkDB
All DBs
Position
4:complement(134395489..134430240)
Genome browser
AA seq
2162 aa
AA seq
DB search
MATSLASQLRAIKSIHKGTPDPIRRPLTRPSILFDPKEAADIDLRSILSIALSGLEALIE
LDARFGKYKDTLFSQTSLELGRGKMVQKEEAQVETLDFDYSKTLEYLIRRYEIHAFNTEE
LVLCTLPYHDTHMFVRVVQLLDLGDKKWAFLEGVKTSGAPPPRKVIVQQCIRDKGILEIL
CDYAKPSSEFQHARPVICFCTAVIVEALGSIPKLDTDTVQRVLPFVSNGLNPDMKGSRDH
KAGALMVVGLLATRSMLAPKLIQSLVFNISRVAQHDAKQSADLPWIRVTIMAIVTLVQSQ
STQVFSKKTMMVLKEIRDLAGVLSGLSQEFNIQKFLCLYLETLVDYSSSDASYLHGLINM
LETLQIKEIIDKVVSKILAHCMRFLHNKDTSNLHEKGEWAKKLLVVIDKHYSSELREAVQ
KFLESSKMNLKEGDSNFRSLCQMFDEGLEMPSDTCDSKFWFSLEHPKAEIRLAALSGIAA
SGILNDMSANPEKLLNAQNAIVRRLHDDDLTVVQAALSVGLAGIVNPSCLLRSYRDVFFR
CIDIINRSTSATSLAIDVAILCLEHMVLDVPMDHLDYSKEVASIIFPLLLVLPKTWRLNL
KALELAKQLRWPFYDDSNIDLDPTSSEKGKILESGYITNVNFKTTEALAETFRKNPDVHI
EWLVECRRCSEQARSLFLLIILQASVIHNEDSCSVLKLYRACSASLRENWHQMEPHGRIG
SSEEFSLDKFEKSCLGLVDQLLSTDVETLNIKIHICIYWCVLKACSESVKRSASADHCEQ
LTMLNEMFLFFTTSPSKNIFRKHIHFLVKNCSSSPFQFLCKYFTEGGFPVGVQVESLCLL
STLSSMYGSLERSNINEDGYLEFLLGFPSLLVPLSNTNKDVRTAAANCIAGIYELWRQFD
VSRLKNGSDTILSRCLLTPTFGEFLESIVSQTELISSDADFLPSFFTSMLSTSGHSLMVS
EDINKRFDQASKDAILLFILSSALKFSSYGKLVVLSLFQGLGSSILHFEGVRILLFELLE
RRDKEHLRTGQSGQVLSQIEVETLCLLLVICVHPSNSVCVERDIFDCLIKALQVDSSSSD
KSVVVQPCITVLQNITCSFYDGLEAEMQDDLFGNLVFLFRNDNVDIRNAATEAVLLINIS
CSTIVRLFALLLGPDQQNGSSKRVKRERAVTWRRMSLDENLLDREETTLYLIGSLLDILL
LKKHIEKRDSLVQPLFRVLEKLFSKKWLLGLVSQVDKGSGSLSDVSESISGGIYYAQQTV
LSILKDITDTYLVEHPHKDEFSNAFKIDLLVECARSTENVSTRNHVFLLLSSIAKASPGW
LSKYMFEIFTIIGESTVKQIDSHSQHTMEDLISKLVPCWLSETSSIDKLLQIFIKALPDV
PEHRRLTLIVYLLRSLGEKDSLGVLTYHLFHSVISRASNPSDGEGNKHAILSSSTFLSEW
EYVFAVQLSGQYSCDIWFSCLVILLQEIKMHSEREEFFSILHMAMQFIVEKLEDAELFFQ
LESGQHPGHLQVKLGLLMEEVVCHLQLMNVKRKQVSLSRDAMKELKDCSNSVLKKITILM
SPSSYFKSITQLLENSDGNIKKKALGLLCENIKDQSFVQRKCKDKRRTKQKFAIHLDEIA
ITSFNELCLKIVHLISYTVDESETPVKLAAISALEVLSKEVPSDNLKFSTCLACVVNYIR
SPDLAISSACLRSIGSLVNVLGSKALSHLPEIMKLMLEKAHEITCCPIRNSKYSDLWSAN
GVSNQKVPLLLSIAITLEAVIENLGGFLNPYLEDILDLILLHPEYAQDSDAKLNSKAATV
RKLLTEKIPVRLMLTPLLKMYSSALKCGESSLCLVFEMLASIIGVMDRPSIGTYHVKIFE
QCLIALDIRCHLPESIKNVNIVEQSVTDAVLVLTMKLTETMFRPLFMHSLDWADSKLEGS
ESISFDRKITFYKLVNKLLEKHRSLFVPYFKYLLEDCTRHLTEDQDIGLIPLTQKKKKAK
HGNASSVAKPKDVLSHKQWHLRALVLKSLYQCFLYDTTDLKFLDASNFEVLLKPIVSQIV
VDPPSSADVLLDMPTVDEVDETLVLCLGQMAVTAHSDVLWKPLNHEVLMQTRSEKTRPKI
LGLKVVKYLVEHLKEEYLIFLPETIPFLGELLEDVELPVKTLAQEILKEMETLSGENLQQ
YL
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atggctacttctctcgcttctcagcttcgcgctatcaaatcaatccacaagggcaccccg
gacccaatccgtcgacctctcactcgcccctcaatcctgttcgaccccaaagaggccgcc
gatatcgatctccgatccattctctcaatcgctctctccgggctggaggccctcattgag
cttgatgctaggtttgggaaatataaagatactctttttagtcagacgagtttggaatta
ggccggggaaagatggtgcagaaggaagaggcacaagttgaaacgctcgatttcgattat
tcgaagacgcttgagtatttaattcgtcgatacgagatccatgcatttaatacagaagag
cttgttttgtgtacgctgccttatcatgatacccacatgtttgttagggttgtgcagttg
ttagatctgggggataaaaaatgggcttttctagagggtgttaagacctcgggtgccccg
cctccccggaaagttatcgtgcagcagtgcattcgggataaaggaatcttggagatattg
tgtgattatgcaaaaccatctagtgagtttcagcatgcaaggccagttatttgcttttgc
actgctgttatcgttgaagctttaggttccattcctaagctagatactgatacggttcag
agggtcttaccctttgtgtctaatgggcttaatcctgatatgaaaggaagtcgtgatcac
aaggctggtgctttgatggttgtgggtttgctagccacaagatcaatgttagcacctaag
ctcatccaaagtttggtcttcaacatctcaagggtagctcaacacgacgcaaaacaatca
gctgacttaccatggatccgcgtgacgataatggccatagttacccttgtccagtcgcag
tcaacccaagtattttcaaagaagactatgatggttttgaaggaaattagagatcttgct
ggggtgctttctggtttatcacaggaattcaatattcagaaatttctatgcctttatctc
gaaacattggttgattatagttcatctgatgcttcctatcttcatggactgattaatatg
ttagagactcttcaaattaaggagatcattgataaggttgtgtctaagatactcgcacat
tgtatgagattcctacacaacaaagatacttcaaatttacacgaaaaaggtgaatgggca
aagaaacttttggttgtgattgataaacattattcctctgagttgcgggaagctgttcag
aaattccttgagagctccaaaatgaatctcaaagaaggcgattccaatttcagaagttta
tgccagatgtttgatgaaggtttagagatgccaagtgatacctgtgattcgaaattctgg
ttttctcttgaacatcctaaggctgagattcgtctagcagctctttcaggtatagctgcg
tctggtatattgaacgatatgtctgctaatccggagaaacttttaaatgcacaaaatgca
atagtccgacgcctccatgatgatgatctgactgttgtccaggcagctttatctgttggg
ctggctggaatagttaatccttcttgtctcctgagaagttaccgggatgtgtttttcaga
tgcattgacataataaatagaagtacatctgcaacttctctagcaattgatgttgccata
ctgtgcctagaacacatggttttggatgtcccaatggatcacttagattattccaaggaa
gttgcttccattatctttcctctgcttcttgttcttcctaagacttggagattgaatttg
aaggctttggaactagcgaagcaacttcgatggcccttttatgatgatagcaacattgat
ctggacccaacatcttcagaaaaaggaaaaatcttggaatctggttacattacaaatgtc
aattttaaaacaaccgaagctttggctgaaacctttagaaaaaaccctgatgtgcatatt
gagtggcttgtagagtgtagaagatgcagtgaacaggcgagaagtttatttctccttatt
atattgcaggcatcagttatccataatgaagattcttgtagcgtattgaagctctatcga
gcttgctcggcatcccttagagagaattggcatcaaatggaaccccatggtagaatcggt
tcctctgaagagtttagcttggataaatttgagaaatcctgcttaggattggttgaccaa
cttttaagcactgatgttgaaactttgaatatcaagatccatatttgtatttattggtgt
gtgctgaaagcatgttcagagtcagttaaaaggagtgcttcggccgatcattgtgagcag
ctaacaatgctcaatgagatgtttctgtttttcacgacatcaccttccaagaacatattc
agaaaacacatacattttcttgtgaaaaattgcagcagctctccttttcagtttctttgc
aaatatttcacagaaggaggtttccctgttggagttcaagtggagagcctatgtttactt
tcaactctttcttctatgtacggatcattagaaaggagcaatatcaatgaagatggttac
ctggagtttctacttggatttccttcacttcttgtcccactttctaatacgaacaaggat
gtacgaacggctgctgcaaactgcattgcgggaatctatgaactttggcgtcagtttgat
gtatctcggttaaagaatgggagtgatactattttgtctcggtgcctattgacaccgact
tttggggagtttttggagtcaatagttagccaaacggaattgatctcatcagatgctgat
tttcttccatcattttttacatcaatgttaagcacgtctggtcatagccttatggtgtcc
gaggacattaataagaggtttgatcaggcttcaaaggatgccatattgctttttatattg
agttctgctcttaaattttcctcttatggaaagctagtcgtactctcattgtttcaaggg
ttggggagttccattttacatttcgaaggagtcaggatattgctttttgaacttttggaa
cgacgagacaaagagcatctcaggactggccaatctggtcaagtactgtcacagattgaa
gtggagacattatgtttgcttttggtgatttgtgttcatccatcaaactctgtatgtgtt
gagagagacatctttgattgtctgatcaaagctttgcaagtggatagttcgtcttcggat
aaatcagttgttgtacagccatgcatcacagtcttgcaaaatattacgtgttccttttat
gatgggttggaggctgagatgcaggatgacttgttcggaaatctggttttcctttttcga
aatgataatgtagatatccggaatgctgctacagaagctgttctgctgataaatattagt
tgttcgacaattgtcagactctttgctttgcttcttggtccagatcaacaaaatggttcc
tcaaaaagagttaagagagaaagagctgttacttggcgcagaatgagccttgatgagaat
ttgcttgatagagaagagacaacactttatcttattggctcgttgcttgatatcctattg
ttgaagaagcatatagagaaaagggattccttggtgcaaccactttttcgggtgctagag
aaactcttttcaaagaaatggcttcttggtctagttagtcaagttgataaaggaagtgga
tccttatctgatgtttctgaatcaatcagtggagggatatattacgctcaacagactgtc
ttgtcaattcttaaagatatcactgacacttatttggtggaacatcctcataaggatgaa
tttagtaatgcgtttaaaatagatctattggttgagtgcgctcgctctactgagaatgtt
tcaactcgcaatcatgtattcttgttgctctcttctattgcaaaggcttctcctgggtgg
ctttcaaagtatatgtttgagatatttactatcattggagagtctaccgtaaaacagatt
gatagtcattctcaacatacgatggaggatctgatatcaaaacttgttccatgttggtta
tctgaaaccagcagtatagacaagctgcttcagatttttataaaggcattgccagatgtt
cctgagcacagaagattaacactaatagtataccttttaaggtctttaggagaaaaagat
agcttaggtgtgctgacatatcatctttttcattcggtgatatctcgggctagtaatcct
tcagacggtgaagggaataagcatgctatactgtcctcttcaaccttcctttctgagtgg
gaatatgtttttgcagtacaactgagcggccaatactcgtgtgacatatggttttcatgt
ttagtaattcttctacaggaaattaaaatgcatagtgaacgtgaagaatttttctctatc
ctacatatggcaatgcaatttattgtagaaaagttggaggatgctgaattgttttttcag
cttgaatctgggcaacatccaggtcatcttcaggttaaacttgggttgcttatggaagag
gtagtctgccacctgcaacttatgaatgtcaaaagaaaacaagtcagcttatccagagat
gctatgaaggaacttaaagattgctcaaatagtgttctgaagaaaattacaattctcatg
tcaccctccagttacttcaaaagcataactcagttactggagaatagtgatggaaatatt
aaaaagaaggcacttggattattatgtgagaacataaaggatcaatcttttgttcagagg
aagtgcaaagataaacgaagaacaaagcagaaatttgctattcatctagatgaaattgct
atcacatctttcaacgagctgtgcttaaaaatagttcacttgatttcttatactgtggat
gaatcggaaactcctgtaaagctggctgcaatttcagcactcgaagtattatccaaagaa
gttccatctgacaatttgaaattttcaacatgccttgcctgtgtagtgaactacattcgg
tctcctgatttggctatttcttctgcttgccttcggtcaataggttcactcgtcaatgtt
cttggttcaaaagctttatcacatcttcctgaaattatgaaactcatgttagagaaagct
catgaaataacctgttgtcctattagaaattctaaatatagcgatctgtggtctgctaat
ggagtttcaaatcagaaggtacctcttttgctgtccattgcaattacattggaggctgtc
attgaaaatcttggtgggtttctaaatccatatcttgaggacatcctggaccttatatta
cttcacccagagtatgctcaagattctgatgcaaaactgaactcgaaggctgctacagtt
cgaaagctcctgacagagaaaatcccagttcgccttatgcttaccccgttgctaaaaatg
tactcctctgccctcaaatgtggtgaatccagtctatgtttagtttttgaaatgctagca
agtatcattggggtaatggataggccatctattggtacttatcatgtaaagatatttgaa
cagtgcttgatagcacttgatattcgctgtcatcttccggagtcaataaagaatgtaaac
atagtagagcagagtgttaccgatgccgtgcttgtactgaccatgaaacttacggaaact
atgtttcggccccttttcatgcatagccttgattgggcagattctaaacttgaaggaagt
gagagcataagtttcgacagaaaaattactttctacaaactggtgaataaacttctcgag
aaacaccgatctttgtttgtcccttatttcaagtacttgcttgaggattgcacacgacat
cttactgaagatcaagacataggtttgatacctttgacccaaaagaaaaagaaggccaaa
catgggaatgcatcttctgttgcaaagcccaaagatgttttatcccataagcagtggcat
ttgcgggctcttgttttgaagtctttatatcagtgcttcctctatgacacgacagatctg
aagtttcttgatgcctcaaattttgaggtcctcctgaagcctattgtttcccagattgtg
gtagatcctccatcctctgctgatgttttattggatatgcctactgtagatgaagttgat
gaaacactggttttgtgccttggtcaaatggctgttacagcacattctgatgtcttgtgg
aagcctttgaaccatgaggtgctgatgcagactaggagcgaaaagacccggccaaagatt
ctcgggttgaaggttgtcaaatatttggtggagcacttgaaagaggaatatcttattttt
ctaccagagaccatcccatttttgggtgagctgcttgaagacgtggagcttcctgttaaa
actcttgcccaagaaattctcaaggaaatggaaactctcagtggcgaaaaccttcagcag
tacctttaa
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integrated database retrieval system
