Asparagus officinalis (garden asparagus): 109839521
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Entry
109839521 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aof01001
]
109839521
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109839521
Enzymes [BR:
aof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109839521
Protein kinases [BR:
aof01001
]
Serine/threonine kinases: Other
Other
109839521
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109839521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
LisH
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
NBCH_WD40
ANAPC4_WD40
Phage_Mu_Gp27
Motif
Other DBs
NCBI-GeneID:
109839521
NCBI-ProteinID:
XP_020263574
LinkDB
All DBs
Position
4:138502617..138517069
Genome browser
AA seq
1783 aa
AA seq
DB search
MEDSVKVSPDDCDWKRDLGGDKPTDSEMLRTYATGLLAISLIGAGQVIEDALKKEVGLPR
KLMRYLRTRILGDVTVGQKDASFPTDSKHSNTPLRVREESRGRSLQVLDASRLDGVRPGD
EGLSGEQDGARERNMSIRQGHGEESRVDGGESLKSELVDSLSHVVGIHEMIDEDDDLAHD
GRNTMDLIDGRSKYGEWSVVGRATRDEIADESVRDESSRRRVNRCWSRSRGKSIRSEGTL
ENERPFMSPPGLQLAGVRECRDRNQGRNDDVKRLMDTKSNSGRTCYDVSTIKEDSDERFR
GCTIGSRDISEIVEKATRAAEAEARTANAPEEAIKAAGDAAAELVKSSAFEAWKNMNDEE
AAVQAASKAASTVVDAAKAVEVSRNTSIVSNDLTGLKMVKSDIDEKLEELFILDKEPLAR
LREKYCIQCLEILGEYVEALGPVLGERGVEVCISLLEHCLKDEGSIEQLTLLPEVLKLIF
VLAAHKKFAAGFIDKNGIQGLLSVPRIPQTFFGLSSCLYTIGSLQGIMERVCALPSDTVL
KVVELALQLLECPQDQARKNAALFLGFAFVFRAILDAFDAQEGLQKTLNVLHGAASVRSG
GNSGALGIPNGTLRNDGSPAEVLTASEKQIAYHTCVALRQYFRAHLLLLVDSLRPNKNSR
TTVRRAANKPLDISNEAMDAVFLQIQRDRKLGSAFARVRWPAVDKFLTSNGHTTMLELCQ
APPGERYLHELGQFALGILHIVTFIPQGRKVVVHASLSNGRVGMAVILDAANSFGYMDAE
LIHAALNVLVNLVCPPPSISNKPSASAQGQQSVSVVNDAATEIRERNTERNITDRTVPLL
TQNDNRERIGEGNMGERGAPFTGGNSQISVSGVSSGMVGERRISLGPGTGSAGLATQMDK
VYHLARQAVRANNGIKVLLHLLHPRMITPPQTLDCLRALACRVLLGLARDHTITHILTKL
QVGKKLSELIRDSGSQAAGAEQGRWQAELTQVAIELIAIVTNSGRASTLAATDAAAPTLR
RIERAAIAAATPITYHSRELLLLIHEHLQASGLTASAALLQKEADLTPLPPLSAPQPPLH
QTSLLESSTMQLPWPSGRVSSGFLLDNAKPSSVDESAGAKSDSNLSSWRKPLVFTKSQLH
SPASLNYKTSALKSPSVSNRGSEDTSSLSDAKSNVDIEPPLKTPLLLPLKRKFLDVKDPN
SLSSKRPATAELVSQSPVFQTPNIVRRANLQVDTTGLSPAANATPRDPGRTTSVLFDNNS
DEHLYQGTPGAPVTPFSQLTNPADAQPGNAERMTLDSLVVQYLKHQHRQCPAPITTLPPL
SLLHPHVCPEPSRSLNAPINVTARVSNREFSKHYGGIHAHRRDRQFVYSRFRPCRTCRDD
AALLTCITFLGDSFRIATGSHSGELKVFDLNDGSVLESHLCHQSPVSIIQSAFSGDTQMI
LSSSSYDVKLWDASSVSAGPLHSFDGCKAACFSPSGTMFAALSTEASHRDVLLYDIQTQN
VEFRLPESSSGPSAPGRGHVQPLIHFSPCDTRLLWNGTLWDYRSACPIHRFDQFTDYGGG
GFHPARNEVIINSEVWDLRKYNKLLRNVPSLDQTVITFNSSGDIIYAILRRNXFAAFRTI
DAISYTDIATVPVDRCVLDLSVDPTDSYVGVVAMDDHEEMFSSARLYEIGRRRSTDDDSD
PDDGPDTEDEDDEEDDENDDDEDADDSMLGDLEDVDDIDSDDLSNEDDDGDSGDELEGDG
EFMDGGHGILEIMAEGEDGEDDDDSEVLEDFSSGAEEDFDYGF
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcagttaaagtgtctcctgatgattgtgattggaagcgtgacttagggggc
gataaaccaacagattctgaaatgctaagaacttatgctactggactccttgcgatatct
ttgattggggccggccaggtgattgaagacgctctgaaaaaagaagtaggtttgccgaga
aagctaatgcgttatttgcgtacacgaatacttggggatgttactgttggtcagaaggat
gcttcttttccaactgacagtaaacattccaatacacccttaagggttagagaagaaagc
agaggcagatctctgcaggttttggatgcatctcgattggatggagtaagacctggagat
gagggattatcaggtgagcaggatggagctcgtgaaagaaatatgagtattaggcaagga
catggagaagagtcccgtgtagatggtggtgagtcgctgaaatctgaacttgtggattcc
ttatctcatgtggttggcatacatgagatgattgacgaagatgatgatcttgctcatgat
ggaaggaacaccatggatttgattgatggaaggtcaaaatatggtgaatggtctgttgtt
ggaagagcgacaagagatgagattgctgatgaaagtgtgagggatgagtcatcaaggcga
agggtaaatcgttgttggtctaggagcagaggaaaaagcatccgtagtgaaggcactttg
gaaaatgaaagaccttttatgtctcctccaggtttacagttagctggagtgagggaatgc
agggataggaatcaaggaagaaatgatgatgtcaaaagacttatggatacaaaaagtaac
tcaggcaggacttgttatgatgtctctacaatcaaagaggatagtgacgaacgatttaga
ggatgcactattgggtccagggatatatctgagattgtagagaaagcaacaagagctgcg
gaagcagaagccagaacagctaatgcaccagaagaggcgatcaaagcagctggagatgca
gctgctgaactggtaaaatcttctgcttttgaggcttggaaaaacatgaatgatgaagaa
gctgctgttcaagctgcttctaaagctgcatctacagttgtggatgctgctaaggcagtt
gaggtttcacggaatacaagcatagtcagcaatgatctcacgggtttgaagatggtgaag
tctgacatagatgaaaagctggaggaactgttcattttggataaggagcctctggcacga
ctcagagaaaaatactgcattcagtgccttgaaattctgggggaatatgttgaagcttta
ggtcctgttctgggagaaagaggtgtggaagtgtgcatttcactcttggaacactgtttg
aaggatgaaggttcaattgagcagttgacattactgcctgaagttctcaaactaatcttt
gtcttagctgctcataagaaatttgctgctggatttattgataaaaatggtattcaggga
cttctttctgttccgaggatccctcaaaccttctttgggctttcttcttgcttatatact
attggctcccttcaggggatcatggaacgtgtttgtgcgttaccttctgacacagtgctt
aaggtggttgagttggcacttcagcttcttgagtgtcctcaggatcaagctagaaaaaat
gctgctcttttcttaggttttgcatttgtgttcagagccattcttgatgcttttgatgca
caagaaggtttgcagaaaactttaaatgttttacatggtgctgcttcagttagatcaggt
ggaaactcaggagcattaggcataccaaatggaactttgcgcaatgatgggtcacctgcg
gaagttttgactgcatcagaaaagcagattgcttatcacacatgtgttgcgctgaggcaa
tacttcagagcccatctacttctgcttgtggattctcttcgaccaaataaaaatagtcgt
acaacagtccgaagggctgccaataagccacttgacatcagcaatgaggctatggatgca
gttttccttcagattcagcgggacagaaagcttggatctgcctttgcgagggtccggtgg
cctgcagttgacaagttcttaacttctaatggacatacaactatgttggagttatgtcag
gctccacctggtgagcgatatctacatgaacttggccaatttgcgttgggcatccttcat
attgttacattcataccccaaggccgcaaggttgttgttcatgcctctttgagcaatggc
cgtgttggcatggcagtcatattagacgcagccaatagttttggatatatggatgcagag
ttgattcatgcagcattgaatgtattagtaaatcttgtgtgtcctcctccttcgatcagc
aataaaccttctgcatctgcgcaaggtcagcaatctgtttcggttgtaaatgatgcagct
acagaaattagagaaaggaacactgagagaaacatcacagatcgcactgttccattgctg
acccagaatgacaaccgggagcggattggggaaggtaacatgggggaaagaggtgcccca
tttactggaggtaattcacaaatttcagtttctggggtctcatctggtatggttggagaa
cgcagaatatcgttaggaccaggaactggttctgctggccttgctactcagatggataag
gtataccatttggcaagacaagctgttcgtgcaaacaatggtataaaggtccttttacat
cttctacatcctaggatgataacacctcctcaaactctcgactgtcttcgagctcttgct
tgtcgtgttctgttgggtttagctagagatcatacaatcacacacatattgacgaagctc
caggttgggaaaaagctctcagaactcattagagattctggcagccaggcagctggagct
gagcagggaaggtggcaggctgagttgactcaagtggcaattgagttgattgcgattgtg
actaattctggaagagcaagcaccttggcagccaccgatgctgctgcgcccacattgagg
cgcatagagagggcagcaatagctgcagcaactcccattacttaccattccagggaacta
ttgcttcttatacatgagcatcttcaagcatctggcttaaccgcttcagctgcattactg
cagaaggaggctgatttgacacctttgcctccattatcggcaccccaacctcctctccat
caaacctctttgctggaaagctcaacaatgcaactaccttggccctctggccgtgtttct
tccgggttcctcttggataatgcaaagccaagttctgtagatgagagtgcaggtgcaaaa
tcagactccaacttgtcttcatggagaaagccattggtctttactaaaagtcagcttcat
tcacctgcatcccttaattacaaaactagtgcgctaaaaagcccatcggtatctaaccgt
ggttcagaagacacttcatccctttctgatgccaagtctaatgtagacattgagcctcca
cttaaaacacctctactgctgccattgaaaaggaaatttttggacgtcaaggatcctaat
tcactatcttctaagcgccctgctacagctgagcttgtatctcagtcaccagtgtttcag
acaccaaatattgtacgccgagctaatctgcaggtggatactactgggctgtctcctgct
gcaaatgctactccacgtgatcctggaaggacaacatctgtcttatttgataataactct
gatgaacatctataccagggcactcctggggcaccagtaacacctttctcccaacttacg
aatccagctgatgctcaacctggaaatgctgagcgaatgacccttgattctttggttgtc
caatatctgaagcatcagcatcgtcagtgcccagctccgataactacattacctcctctt
tctctcttgcatcctcacgtgtgtcctgaaccaagccgtagccttaacgcacctataaat
gtaactgcacgtgttagcaaccgtgaattcagtaaacactacggcgggatccatgctcat
cgtagggaccgccaatttgtttacagcaggttcaggccatgtcgcacttgccgggatgat
gcagcccttttaacttgtattaccttcttgggtgattcgtttcgcattgcaactggcagt
cactctggtgagctgaaagtatttgacttaaacgatggcagtgtattggagagccattta
tgccaccagtcacctgtttccataattcagtcagcattttctggtgacacccagatgatt
ctttcatccagttcatatgatgtaaagctttgggatgcttcatctgtatcagctgggccc
ttgcattcatttgatggatgtaaggctgcttgttttagtccttcggggactatgtttgca
gcccttagcactgaggcatctcatcgcgatgttcttctttatgatatccagacccagaac
gtggagtttagattacctgaaagctcaagtggcccttcagcaccgggtcgagggcatgtt
cagcctcttattcattttagtccttgtgatacgaggttattgtggaatgggacgctgtgg
gactatcgtagtgcatgtcctattcatcgatttgatcaatttacagattatggtggtggt
ggattccatcctgctaggaatgaggtcataataaactcagaagtgtgggacctccgaaaa
tacaacaaactcctccgaaacgtcccctctctcgaccaaacagtcatcaccttcaacagc
agcggcgacatcatctatgcgattctccgccggaacntctttgccgccttccgcaccatt
gatgccatcagttacaccgacatcgccaccgtccctgtcgaccgctgcgtcctcgactta
tccgtagaccccaccgactcctacgtcggcgtggtcgccatggatgatcatgaagaaatg
ttctcctcagcgaggctttacgagatcggacggcgcaggtctacagatgacgattctgac
cccgatgatggacccgataccgaggatgaggatgatgaggaggatgatgagaatgacgac
gatgaggatgcggatgattcgatgctgggagatttggaggatgtcgatgatatcgattct
gatgatttgagcaacgaggatgacgatggggatagtggtgatgagcttgaaggggatgga
gagtttatggatggggggcatggaatattggagattatggcggagggcgaggatggtgag
gatgatgatgatagtgaggttttagaggattttagcagcggtgctgaagaagattttgat
tatggtttttga
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integrated database retrieval system
