KEGG   Asparagus officinalis (garden asparagus): 109839562
Entry
109839562         CDS       T05243                                 
Name
(RefSeq) DNA excision repair protein ERCC-1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03420  Nucleotide excision repair
aof03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    109839562
   03460 Fanconi anemia pathway
    109839562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aof03400]
    109839562
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109839562
SSDB
Motif
Pfam: Rad10 HHH_5 HHH HHH_2 HRDC
Other DBs
NCBI-GeneID: 109839562
NCBI-ProteinID: XP_020263628
LinkDB
Position
4:complement(139853822..139872587)
AA seq 381 aa
MEKVDGGEQERKEKRRKAVIQIPSYDEVFSSAASVSSSSAADGCADPRPHNPPRPPPPPP
PPNSFSEAFSFVKSSEFYAPPPRPVAESQASTSGSNSSNAPVHSRNAILVSHRQKGNPLL
KHIRNVRWTFADIVCDYLLGQSSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRVVLCHV
DVEDVIKPLLEVTKTAMLHDCTLLCGWSLEECGRYLETIKVYENKPSDLIREQTDTDYLS
RLTHALTTVRRVNKTDVVTLGSTFGSLSGIMDASMDELARCPGIGERKVKRLYDTFHEPF
RRVSSRPAVVASETPTKEDNKDKNVEPPSDESEVRKEHTLNVKSALSAAFAKYAERVRKP
DEKSSSPEKVEGSSSVTAAPK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggagaaggtcgacggaggcgagcaagaacgaaaagagaagagaagaaaggctgtaatc
caaatcccatcctacgacgaagtcttcagctccgccgcctccgtctcctcctcctccgcc
gccgacggctgcgcagaccctcgacctcacaatccaccgcggcctcctcctcctcctcct
cctccaaattcattctccgaagccttctccttcgtcaaatcctcagagttctacgcccct
cctccaaggcccgttgccgagtcccaggcttcgacttctggttctaactctagtaatgcg
ccggtccatagtcgaaatgcgattcttgtcagccataggcagaaggggaatccgttgctc
aagcacattaggaatgtgcggtggacatttgcggatatcgtgtgtgattacttgttgggt
cagagctcttgtgctttatatctaagtcttcggtatcaccttctccatccagactaccta
tattttcgaataagggagctgcagaagaattttaagcttcgtgttgttctgtgccatgtt
gatgtggaagatgtaattaaacctttacttgaagttacgaaaacagcaatgcttcatgat
tgcacccttctatgtggttggagcttggaggagtgtggtcgctacttggagactataaag
gtttatgaaaacaaaccttccgacctcattcgtgagcaaacagatacggactatttatca
cggctcacacatgcactcacaactgtcagacgtgttaacaagacagatgtagtgactctt
ggatcaactttcgggtctctttctgggattatggatgcttctatggatgagttagctcgt
tgccccggcatcggtgaacgcaaggtgaagcgcttgtatgatactttccatgaaccattc
aggcgagtctccagccgacctgcagttgttgcgtctgagactcccacaaaggaggataac
aaggacaaaaacgttgagccaccttcagatgaatcagaagttaggaaggaacataccctc
aatgtcaagtcagcactctctgctgcttttgccaagtatgctgagagagtaagaaagcca
gatgaaaagagtagttctcctgaaaaggttgaaggcagtagtagtgttaccgcggcccca
aaatga

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