Asparagus officinalis (garden asparagus): 109839621
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Entry
109839621 CDS
T05243
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109839621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109839621
Enzymes [BR:
aof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109839621
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109839621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF3134
Motif
Other DBs
NCBI-GeneID:
109839621
NCBI-ProteinID:
XP_020263708
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All DBs
Position
4:142980579..143014865
Genome browser
AA seq
1163 aa
AA seq
DB search
MAPTKSKKPDYSSLRHLFKPHIESFDYFIDKGMELALTSIRPVEIADGNTKLRIYFGEPR
LLPPRDASANRNIYPQECREARTTYKGDFSVEVFFQYNDGPSIRHRLSFGQLPIMLMSKR
CHLRGADPSKLIYHKEEATEMGGYFICNGLERLCRLLILQKRNYPMSLVRKVFRARGDGY
SDKAVVMRCVREDQSGVTVKLYYLQNGSARLGFWIGGREFLLPVGIVLKALIDTNDHEIY
VSLTCCYKERYQREKGAVGTQLIGERAQIILDEVRNLSLFTRSDCLKHIGEYFKPAIDGF
EAESYTAVADAVLRDYIFVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVL
LPGHLISIYLKEKVVEWLRRSRRLLAEEMAKSKDFSIKDPEQVKKFLARSSVSIGRSIES
MLKVGRLATASSLDLPQKEGVTIQAERLNYLRFISHFCAVHRGAAFAKMRTTVVRKLMPE
SWGFLCPVHTPDGEPCGLLNHMTSTCCITSYFNTEGKVKDFRDIQRSIQNVLIRLGMSPL
LPKLEHAGPPEVLQVLLDGRLVGSIACTEVEKAVAHIRSLKLSASSRVGLIPDDLEVGYV
PLSLGGAYPGLYLFTSPSRFLRPVRNISHTTDQNIELIGPFEQAFMEIRCADGSDGGRRS
FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIRFRTDVKAYH
LQTPQSPIVRTASYNKYCVDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHI
YQTESIDLAERQEKSSKKVFARSNDKSMSSSIDSDGLPYIGQMVKPKEPLYSTYDDLTSD
VKSTLLKGSEPVIVDNVTVIGTASKNCMQKVNIRTRRIRNPIIGDKFSSRHGQKGVCSQL
WPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASSVD
KKDGKERSERSSLVDELGPMLASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHM
VSDKFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERDSVLAHGAAYLLHDRLHSCSDYH
IAEVCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKNFTCHACKTKKGMETVAMPYVFR
YLAAELAAMNIRMELKLSNRAGC
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaccaaatcaaagaagccggactactcctcgctccgacacctcttcaagccc
cacatcgagtccttcgactacttcatcgacaaagggatggagctcgctctcacctccatt
aggcctgttgagatcgccgatggcaataccaaattaagaatatattttggtgagccgcgg
ttgttgcctccaagggatgcttcggccaatagaaacatttatccgcaagagtgcagagaa
gcaagaacaacgtacaaaggagatttctcagtcgaagtatttttccagtacaatgatggg
ccctcaattaggcataggctcagctttggtcaattgcccataatgttgatgtcgaaacgc
tgtcatttaagaggtgctgacccctcaaaacttatttatcataaggaagaggccactgaa
atgggtgggtacttcatttgtaatgggttggaaagactctgtcgacttctgattctgcaa
aaacgtaattatccaatgagtctggtgcgcaaggtatttcgtgcacggggagatggatac
agtgataaggcagtcgtgatgagatgtgttcgagaagatcagtctggtgtgacagttaaa
ttgtattatcttcaaaatggaagcgcaagacttggtttctggattggaggaagagagttc
ttgcttcctgtcggcattgtcttgaaggctctcattgacactaatgaccatgaaatctat
gtgagcttaacatgctgctataaagagagatatcagcgggaaaagggtgctgttggcacg
cagctgataggtgaaagggctcaaataattcttgatgaagtcagaaacttgtctcttttt
acgcgctctgattgcttaaagcatattggggaatactttaaaccggccattgatggattt
gaagctgaaagttacacagctgttgcggatgctgttctgagagattatatatttgtgcat
cttacaagcaaccatgacaagttcaatttgctaatttttatgctacagaagctttatgca
cttgtagatcagactgctgcacctgataatggggacgtgctgcaaaatcaggaagttcta
ctacctggacacttaatttctatttatcttaaggaaaaagttgtggaatggctacgcaga
tcaaggcgcctgcttgctgaagagatggccaaaagcaaagacttcagcattaaagatccc
gagcaagtaaagaaatttctggctcgaagttctgtttcaataggcagaagtattgagagc
atgttaaaggttggaagattggctactgcatcgagtttagacttacctcagaaagaagga
gtgactattcaagcagagagactaaactatcttagattcatatctcatttttgtgctgtt
catcgaggtgctgcctttgccaaaatgcgaacgacagttgtacgaaaactgatgccagag
tcttggggtttcctctgtccagttcatacacctgatggagagccttgtggcctgctcaac
catatgacatctacatgctgtattacctcttacttcaacactgagggtaaagtaaaagat
tttcgtgatatacaaagatcaattcagaatgtgttgattcgtcttggaatgagtcctttg
ctgccaaagcttgaacatgccggtcctccggaggttcttcaagttctattagatgggcgt
cttgtaggttctattgcgtgtacggaagtagagaaagctgttgcacatattcgtagcttg
aagctttctgcatcttcgagggtcgggctgattcctgatgatctggaagtgggatatgta
cctctaagtcttgggggagcctaccctggcttgtaccttttcacttctccttcaagattt
cttcggccagttaggaacatttcccataccacagatcaaaatattgagctgattggtcca
tttgaacaggcatttatggaaatacgatgtgctgatggtagtgacggtggaagaagatcg
tttccagcaacacatgaagaaatccatccaactggcatacttagtgtagttgcaaacctc
acgccatggtctgatcacaaccagagtccccgtaacatgtatcagtgtcagatggcaaag
caaactatgggattttcttcacaagctatacgatttcgtacggatgtgaaagcataccat
ctacagacacctcaatctccaatcgtgcggacagcgtcgtacaataaatattgtgtagat
gaattccccactggaacaaatgcaattgtagcagtgctagcttactcaggctatgacatg
gaagatgccatgatcttgaataagtcatccgttgatcgtgggctgtgtcgtggacatata
tatcagacagaatcaattgacttggcagagaggcaggaaaaatcaagtaaaaaagtcttt
gcaagaagcaatgataagagcatgagttcttccattgattctgacgggcttccttatatt
ggacagatggtaaaaccaaaagaaccactgtatagcacttacgatgacttgactagcgat
gtaaaatccactcttctcaagggatcagaacccgttattgttgataatgtgactgttata
ggtacagcttcaaagaactgcatgcaaaaggttaatatacgtactcgccgcattagaaat
cctatcattggtgacaaattcagcagcagacatggacagaagggtgtttgctctcagcta
tggcctgatattgatatgccattttctgcagttaccggaatgcgacctgatctcataatt
aatcctcatgcatttccttccagaatgacaattggaatgcttttagaatctattgctgct
aaggcaggaagccttcatgggaagtttatagatgcaacaccttttgcgagctcagttgat
aaaaaggatggaaaggaacgctcagaacgaagctctttggttgatgaactgggccctatg
ctagcatcccatgggtttaattatcatggatcagaggtcttgtatagtggattttatggt
acagagatgacttgtgaaatatttattgggcctgtatactaccaacggcttagacatatg
gtgtctgacaaatttcaggttcggtccactggaactgtggacccaataacccggcaacca
gtcggaggaagaaagcgagggggaggtattcgattcggtgagatggaacgagactctgtt
cttgctcatggagctgcctatctcttacacgaccgtctccactcttgctcggattatcac
attgccgaggtttgctctttttgtggcagtttacttactgcgacagtaattcaacagcag
aagagaatagtgcaagagattccaggggttccccaaaccagaactccgaagaattttacg
tgccatgcctgcaaaaccaagaaggggatggagacggtggcgatgccttacgtttttagg
tatttggccgctgagcttgcagccatgaatatcagaatggagcttaagctgagtaataga
gctgggtgctaa
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integrated database retrieval system
