Asparagus officinalis (garden asparagus): 109840119
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Entry
109840119 CDS
T05243
Name
(RefSeq) ribonuclease Z, chloroplastic-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109840119
Enzymes [BR:
aof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
109840119
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
109840119
Prokaryotic type
109840119
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
109840119
NCBI-ProteinID:
XP_020264223
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Position
5:90478056..90483064
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AA seq
362 aa
AA seq
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MQTSLTTLSSLTHSQFFYLSHGSVTRTLTTAADLIRCGAAASNKRSASSASSGAPLGFVS
AIERAMDKEEEYRKARAQVQRKGVEVEGYMIEGSSIGGHETCVIVPSLNVAFDIGRCPSR
AVNQDNLFITHAHLDHIGGLPMYVGTRALYSLKPPTIFVPPSIKADVEKLFEVHRSMSKD
ELKHDLVALDVGETYEIRNDLVVRPFRTHHVIPSQGYVIYSVRKKLKKQYAHLKGPQIKK
LKVSGVEITDTILSPEVAFTGDTMSDFIQEPRNADALRAKVLITEATFLDEECDIEQARE
RGHMHLFEIMEHSQWFRNKAILLTHFSSRYKTEDIRHAVSKLQKRVSAKVVALTEGFKST
YS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcagacatctctaacgaccttatcctcactcacccactcccaattcttctacctctct
cacgggtcggtgaccagaaccctcaccaccgccgccgacctcatccgctgcggcgccgcc
gcatccaacaagagaagcgcctcctccgcctcttctggggccccactagggttcgtgtcg
gcgatagagagggcgatggacaaggaggaggagtatcgaaaggcgagggctcaggtacag
aggaagggcgtggaggttgaagggtacatgattgaaggatcctctatcggcggccatgag
acttgcgtcattgtgcctagtttgaatgtggcgttcgatattggccggtgcccgtcgagg
gcagtgaaccaggataatctgttcattactcatgctcatcttgaccacattggaggtctt
ccaatgtatgtaggaactcgtgcattatacagcttaaaaccaccaacgatatttgttccg
ccaagcattaaagcggatgttgagaagctatttgaggtccatcgatccatgagcaaggat
gagctgaaacatgatttagttgcgcttgatgtgggggagacttatgaaatacggaatgac
cttgttgtcagaccatttagaactcaccatgtcatacctagccagggttatgtaatttac
tcagtgagaaagaagttaaaaaagcagtatgctcacttaaagggtcctcagattaagaaa
ctaaaggtttcaggcgttgagattacagacacaatattgtctccagaggttgcatttaca
ggagatacgatgtctgatttcatacaggagccacgaaatgcagatgccctaagagcaaaa
gttcttatcactgaggcaacttttctagatgaagaatgcgacattgagcaagcacgggaa
cgtggtcatatgcatttgtttgagattatggaacactcccagtggtttcgcaacaaggcc
atcttactcacccacttctcatcccgttataaaacagaggatatccgacacgctgtgtct
aagctgcagaaaagggtgtctgcgaaggtcgtagctcttacagaaggcttcaaatccact
tactcctga
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