Asparagus officinalis (garden asparagus): 109840134
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Entry
109840134 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
109840134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109840134
Membrane trafficking [BR:
aof04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109840134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_14
TPR_19
CFAP70_TPR_C
TPR_7
RMD1-3
PPTA
TPR_9
TPR_12
TPR_20
CFAP70_mid_TPR
CABIN1_N
PRP6_TPR
NGF
Motif
Other DBs
NCBI-GeneID:
109840134
NCBI-ProteinID:
XP_020264241
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Position
5:complement(90787298..90809569)
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AA seq
756 aa
AA seq
DB search
MAMRDLVXAACAVPGSSSSSNPLGALAGALFQSSSKTQEIRGLPGSTVTVPVPSDFRGEA
PLSTIPGSEYDNQQFQQPDTQSSAFLNGFRPAVHGDLADAWDEVHRPSVLPHAPLTGNEP
HFAEFEQIYVTGANSRIQSTFDGPPQRVLSSFLHSFMDSGRAGVPFRPAALPALGLSESD
KQCIRDRSCIMARHIFADKSEDYINAQVNALLHSLDIDGDQRMRGPPRGQYPELEEYWTE
SQGALRPGMPHPTDRWVTEFSKQRESNNPEAWANSFEQLHGSNGWASEFEQEQFQSTSDG
QKTLMTLPNAAAAQQAHMLAHTLAQNDDPKFQNSKFLQFVSKMSRGELIVDDNQIKPATG
STSGDWADEYQTQHNANSNSWADQFVQEKLSHGPDNWVNEFASESQHAGVDDPWVNEFSK
LNLENDWAEEFGHQVSQGVLGESSSDQWIDAYDKYVDDQLKTSKQSSSASRGVYVFSDMN
PYVGHPNPLKEGQELFRKGLLSEAVLALEAEVLKNPDNAEGWRLLGITHAENDDDQQAIA
SMMRAQEADPTNLEVLLALGVSYTNELEQPEALKYLYRWLQNHPKYGAIAPPQQGDSLYY
ADVARLFGDAAQMSPEDADVHIVLGVLYNLSREYDKAIESFKTALKLKPRDYSLWNKLGA
TQANSVQSSEAISAYQQALDLKPNYVRAWANMGISYANQQLYEESIRYYVRALAMNPKAD
NAWNYLRISLSCASRNDMFEACDSRNIDVLQKEFPL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagggatctggtcnatgccgcctgcgccgttcctggcagctcctcctcctcg
aatcccttgggcgctctcgctggcgctctctttcagtcctcctccaagactcaggaaata
aggggtcttcctggatccactgttacagtgcctgtgccttcagactttaggggtgaagcc
cctctgtcaactattcccgggtcagaatatgacaatcaacagtttcagcagcccgatact
cagagctctgcattcctaaatggcttccgtcctgctgttcatggggatctggcagatgct
tgggatgaagtccatcgaccttctgttcttccccatgccccgctcacgggaaatgaacct
cattttgcagaatttgaacagatttatgtcactggagccaattctcgtattcaatcaaca
tttgatggaccaccacaaagagttttgtctagtttccttcattcctttatggacagcggt
cgtgctggtgttccatttcgtccagcagcattgccagctcttgggttgtcggaaagcgac
aaacaatgcatacgtgatcgtagttgcatcatggctcgtcatatttttgctgataaaagt
gaagactacatcaatgcgcaggtaaatgcattgctacattctctcgatattgatggcgat
cagcggatgagggggcctccacgtggacagtatccagagctagaagagtactggactgag
tctcagggtgctttgaggcctggtatgcctcatcctacggatagatgggttactgaattt
agtaaacagagggaaagtaataatcctgaggcatgggctaactctttcgagcaactgcat
ggcagtaatggatgggcttctgaatttgagcaggaacaatttcagagtacttctgatggt
caaaaaacacttatgactctacctaatgcagcagcagcacagcaggctcatatgcttgcg
catacattagcgcaaaatgatgacccaaaatttcagaattcaaagtttcttcaatttgtt
tcaaagatgagtcgtggtgagcttatagttgatgacaatcaaatcaaacctgctactgga
tccacctcaggtgattgggctgatgaatatcaaacacagcataatgcaaattcaaactct
tgggctgatcagtttgttcaggaaaagctttcacatggtccagataattgggtgaatgag
tttgctagtgaaagtcagcatgcgggagttgatgatccatgggtcaatgaattctccaaa
ttaaatctcgaaaatgactgggcagaagaatttgggcaccaggtcagtcagggagttctg
ggagaaagttcttctgaccagtggatagatgcatatgataagtatgtggatgatcagcta
aagacctccaagcaatcgtctagtgcttcaagaggggtttatgttttctctgatatgaac
ccctatgttggtcatccgaatcctttgaaggaaggtcaggagcttttccgcaaagggctt
ctgagtgaagctgttcttgctctagaagcagaagttttgaagaaccctgataatgctgaa
ggctggagattgcttggaataacacatgcagagaatgatgatgatcaacaggctattgca
tcaatgatgcgtgctcaagaagctgatccgacaaatctggaagtgcttcttgcacttggt
gtgagttataccaatgagctagagcagcctgaagcattgaaatatctttacagatggctt
caaaatcaccccaaatatggggctattgctccacctcaacagggtgattctttgtactac
gctgatgttgcaagactgtttggtgatgctgctcagatgtcacctgaggatgctgatgtg
catattgttcttggtgtactatacaatctgtcaagagaatatgataaagccatagagtcc
tttaagacagcactaaaactcaagccccgtgattactctctctggaacaagctgggtgca
acccaagcaaatagtgttcagagttcagaagcaatatcagcttatcagcaggcactagac
ttgaagccaaattatgttcgagcatgggcaaacatgggcatcagttatgctaatcagcaa
ctatatgaagaatctattcgctactatgtaagagcacttgccatgaatcctaaggcggat
aatgcctggaattatttaaggatatctctcagctgtgcgtctcggaatgacatgtttgaa
gcttgtgattcaaggaatatcgatgttctccagaaagaatttccactgtaa
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