Asparagus officinalis (garden asparagus): 109840294
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Entry
109840294 CDS
T05243
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109840294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109840294
Spliceosome [BR:
aof03041
]
Complex A
U1 snRNP components
U1 related factors
109840294
Complex B
109840294
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
109840294
NCBI-ProteinID:
XP_020264459
LinkDB
All DBs
Position
5:97002121..97010581
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AA seq
929 aa
AA seq
DB search
MAVASPSSPKTLDPKSDKPDASSEKPNPDPSSQSGNPNPDPNPNQNANPNANPNIVAPPP
PSFAPSFRPLGAPPMPQYSAVPNPNPSIQPPGVSAPVTYMIPGVASGAGSVTVSAPPMRY
PPPGAPPMAYGQVPNGYMTGHPPGIPRYPGPYPPMIRPGFPPRPLPPMGVIPQILRPPIP
GIRGPPVVSPVVRPVVPAVATEKPQTTVYVSKIAPTVDNDFLLSLLRLCGPVKSWKRAQN
PSDGSPTSFGFCEFEAAEGILRALRLLTKLNIDGQELGLKINQATREYLERYVQKKTEQE
KLKATENQAPEKENEGAPGVEKQELQKPAVEGRSEEPDDSGDKENQEHQTFGIVTDEDRE
ADKDASEKITSKIEERLKTKPLPPPPPVRPPVDASVKSNSEVPSKSREVDSEVDIVRSDV
AEDKNDDETTSEAKASSEHDKVETSSPDRGRRHDRSSRERDREHDLKREKERELERYERE
RERERVRREKERDLKIREAERLYNNRLKDWEAREREKEHRRQKEKEREKDRQRERRREIS
KDEDGSDDDEDDTRKRRRRSTTLEEKRRKRQREKEDDLADRLKEEEEIAEAKKRAIEEQR
RMEETKALPDQVNEDREATEMQVDAMVIDGKEAPVAEHVYDGVSGSGNGEATYENSIGGE
LTAGSAALTDMKQNNDVPARKLGFGLMGSGKRTTVPSVFREEDENVEEKKMRPLVPIDYS
TEELQAVQSSVSSTPPNLVAAAEFAKRISGENSKEEKPEMERNRNGRSNDRSSHKERVRN
EDENARHRNDNKEKTRDRSYEREREREDKPKSENKKLLDAKQLIDMIPKTKEELFAYEIN
WDVYDKHELHEKMRPWISKKITEFLGEEEETLVDYIVSSTKEHVQASKMLNLLKSILDDE
AEMFVLKMWRMLIFEIKRVETGISVKPRA
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcttccccctcctcccccaaaaccctagatcccaaatccgataaacccgac
gcctcatctgaaaagcccaatcctgatccctcttctcaatccggaaaccctaatcccgat
ccgaacccaaaccaaaacgcaaaccctaacgctaaccctaatatcgtcgcccctcctcct
ccttcctttgccccatcattccgtcccctcggagctccgccgatgccgcagtactccgca
gttccaaaccctaaccctagcatccagccgcctggggtttccgcgccagtgacctacatg
attccaggcgttgcatctggggccggatcggttacagtttcggcccctccgatgaggtat
ccgcctcctggagctcctccaatggcgtacggccaagtccccaatggatacatgaccggt
catccgcccggaattcctcgttatcctggaccatacccacctatgattcgccctggcttt
cctcctcgtccgctgcctccaatgggtgtgattccacaaattcttcgacctcctattcct
ggaattcgtggtcctcctgtggtttctccagttgtcaggcctgttgttcctgctgttgca
actgagaaaccacaaacaacagtgtatgttagcaagatagctccaactgttgataatgat
tttctcctctctcttcttcgactttgtggaccagtgaagagttggaaacgtgctcaaaat
ccctctgatggctctcctacaagttttggcttttgtgaatttgaagctgctgaaggaatt
cttcgagctctacgtctgctaactaagttgaacattgatggacaagagctggggttaaaa
atcaaccaagcaacccgggaatatcttgaacgttatgttcaaaagaagactgaacaagaa
aagctcaaggccactgaaaatcaagctcctgagaaagagaatgaaggtgcaccaggtgtt
gagaaacaagaacttcaaaagccagctgtagaaggtagatcagaggagccagatgattcc
ggggataaagagaatcaagaacaccagacgtttggaattgttacagatgaagatcgtgag
gctgataaagatgcttcagagaagattacaagtaagatagaagagaggttaaagacaaaa
cctctgcctcctcccccacctgttcggcctccagttgatgcatctgttaaatcaaattct
gaggttccttctaaatcaagggaagtggattctgaggtggatatcgtgagaagtgatgta
gctgaagataaaaacgatgatgaaaccactagtgaggccaaggcttccagtgaacatgac
aaggttgaaacaagctctcctgataggggaaggaggcatgatagaagtagcagagaaaga
gacagggaacatgatttgaaacgggagaaagaacgggaattagagaggtacgagcgcgag
cgagagcgagagagagttaggagggagaaagaaagggacttgaaaataagagaagctgag
aggctatataataaccgtttgaaggattgggaagctagggagagggagaaagaacaccga
cgtcagaaagagaaggagagggagaaagataggcaacgagaacgtcgtagagagatttca
aaagatgaagatgggagtgacgatgatgaagatgatacaaggaaaaggaggcgcaggagt
acaacacttgaggagaagaggagaaagagacaacgggagaaggaggatgacttggctgac
agattaaaagaagaggaagagattgctgaagcaaagaagagggcaatcgaagagcaaagg
cggatggaggaaacaaaagctcttcctgaccaagtgaatgaggacagagaagctactgaa
atgcaagtggatgctatggttattgatggtaaggaagcgcctgttgctgagcatgtttat
gatggtgtttctggtagtggcaatggtgaagcaacatatgaaaacagcatcggtggtgaa
ctaactgcaggatcggctgcactaacggatatgaagcagaacaatgatgttcctgctaga
aaactgggttttggtctaatgggttcaggaaaaaggacaactgttccatcagttttccgt
gaggaagatgagaatgttgaagagaagaaaatgagacccttggtacctatagattactcc
actgaggaattacaggctgtacagtcaagtgtttcctctacaccaccaaatctggtggct
gctgctgaatttgcaaagcgtatctcgggtgagaactctaaagaagagaagcctgaaatg
gaaagaaatagaaatggtcggtctaatgacagatcaagccacaaagagcgagtccggaat
gaggatgagaatgctcgtcacaggaatgataacaaggagaagacgcgtgatagaagttat
gaaagggaaagggagagggaagataagccaaaatcagaaaacaaaaagcttttggatgca
aaacaattgattgacatgattccgaagaccaaggaagagctctttgcctatgaaattaat
tgggatgtttatgataagcacgaattgcatgagaaaatgagaccatggatctcaaagaag
attactgaatttcttggagaggaggaggaaacactggtggactatattgtttcaagtacc
aaagagcatgttcaagcatcaaaaatgctgaatctgctgaagtccatcttggacgatgag
gcagaaatgtttgttctcaagatgtggaggatgctaatatttgaaattaagagagttgaa
acaggaatctctgttaaaccaagggcctga
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