Asparagus officinalis (garden asparagus): 109840301
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Entry
109840301 CDS
T05243
Name
(RefSeq) serine/arginine-rich splicing factor RSZ21-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109840301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109840301
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
SR proteins
109840301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
zf-CCHC_5
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
109840301
NCBI-ProteinID:
XP_020264469
LinkDB
All DBs
Position
5:97352999..97364401
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AA seq
187 aa
AA seq
DB search
MDCVVAVGASKMSRVYVGNLDERVTERDIEDEFRVFGVIRSVWVARRPPGYAFVEFDDRR
DALDAIHELDGKIRWRVELSHDSKGLGGGRGGRSRGGSEDMRCYECGEPGHFARECRTRI
GWGGLGSSRRRSPSPRYRRSPSYGSSSYSPRWRRSSRRRSLSPPRRGRYVSQSPPYRRDS
PYAYRRY
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggattgcgtagtagctgttggcgcaagtaaaatgtctcgggtttatgttgggaacctt
gatgaacgcgtcactgaaagggatattgaagatgaatttcgagttttcggtgtaatccga
agtgtttgggttgcccgaagacctcctggttatgcatttgttgaattcgatgaccggaga
gatgcgttggatgccattcatgaactagatgggaagataaggtggagagttgaactctct
cacgactccaaaggtcttggtggtggccgtggtggacgatcacgtggtggtagtgaggat
atgaggtgttatgagtgtggtgaacctggacactttgctcgagaatgtcgaactcgtatc
ggctggggagggttgggcagcagtagacgccgaagcccgagccctcgatatcgtaggagc
ccaagctatggtagcagtagctacagtccaagatggagaagatcctcaagacgccgcagc
ttgtcacctcctcgccgtggtcgatacgttagccaatcacctccttatcgacgtgactca
ccttatgcctacaggaggtactga
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