Asparagus officinalis (garden asparagus): 109840327
Help
Entry
109840327 CDS
T05243
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109840327
03036 Chromosome and associated proteins [BR:
aof03036
]
109840327
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109840327
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109840327
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109840327
microRNA pathway
RISC loading complex
109840327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Reo_sigmaC
Motif
Other DBs
NCBI-GeneID:
109840327
NCBI-ProteinID:
XP_020264507
LinkDB
All DBs
Position
5:409331..417450
Genome browser
AA seq
915 aa
AA seq
DB search
MNSPTEDGTEGLPPPPPVPPGVVPIKADSERCSPPKKPSTPKRIPMPRRGLAKRGHPIQL
VTNHFKVSVRNVDDYFYHYSVNLKYEDDRPVDGKGVGRKVIDKLHQTYDSELGNKEFAYD
GEKSLFTIGSLPQVKNEFLVVLEDASSNRTAANGSPGGNDSPGENDRKRLRRPYQTKSFK
VELNYAAKIPMQSIAMALKGHDTENSQEALRVLDIILRQHAAKQGCLLVRQSFFQNNPSN
FTDIGGGVLGCRGFHSSFRTSQGGLSLNIDVSTTMIVKPGPLVDFIIENQKVRDPFSIDW
AKAKRMLKNLRIKASPTNMEYKIVGLSELPCNQQMFTLKQRTAKDANGDCDAHTTEITVY
DYFVKHRNIELRYSGDLPCINVGKPKKPTYLPLELCTLVSLQRYTKALSTLQRSSLVEKS
RQKPQERMSVLSNALKYNNYDADPMLQACGVSISAQFTQVDGRVLQAPKLKVGNGEDFMP
RNGRWNFNNKKLFEATCVDKWAVVNFSARCDMRNLVRDLIKCGKMKGIQVDDPFVVLEEN
PSMRRAPAPARVEDMFEQIKSKLPGAPKFLLCLLSERKNSDVYGPWKRKCLAEFGIVTQC
IAPQRVNDQYLTNVLLKINAKLGGINSLLLQERMTKIPLVSESPTLILGMDVSHGSPGHS
DVPSIAAVVGSRQWPSISRYRACVRTQSPKVEMIDSLFKPAGSDDDGIIRELLIDFYTSS
GKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEQWCPKFLVIIAQKNHHTKFF
QPGSPDNVPPGTVVDNKVCHPRNYDFYMCSHAGMIGTTRPTHYHVLHDEIGFAPDDLQEL
VHCLSYVYQRSTTAISVVAPVCYAHLAASQMGQFMKFDDMSETSSSHGGVTAPGAIPVPE
LPRLHEKVCSSMFFC
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccaaccgaagatgggacggagggtttgccgcctccgccaccagtgccacct
ggggtggtcccaatcaaagctgattcggaaagatgctcgccacctaagaaaccatcaact
ccaaagcgtattccaatgcccagacgcggcttggctaagcgaggccaccctatacaactt
gttacaaatcatttcaaagtttctgttcggaatgttgatgattacttttaccactacagt
gtaaacttgaagtatgaagatgatcggcctgtggatggtaagggggttggccgaaaagtt
attgacaaattacaccaaacctacgatagtgagcttggtaacaaggagtttgcttatgat
ggggaaaagagtttgtttacaataggttccctaccacaagtgaagaatgagttccttgtt
gttttggaggatgcatcatcgaatagaactgctgccaatggaagcccaggtggaaatgac
agcccaggggagaatgaccgtaagcgtttgcggcgtccctaccagacaaagtcctttaaa
gttgagctgaattatgctgcaaagattccaatgcaatcaattgcaatggctttaaaaggc
catgacactgaaaactctcaggaagcactgcgagtgcttgatatcatcttaagacagcat
gcagcaaagcagggttgcttgcttgtccgtcaatcctttttccagaacaacccttcaaac
tttactgatataggtgggggcgtcttaggttgtagagggttccactctagcttccgaacc
tcccaaggtggcctgtcattgaacatagatgtctcaacgaccatgatagttaaaccaggg
cctcttgttgattttattattgaaaatcagaaagtaagggacccattttcaattgactgg
gcaaaggcgaagcgtatgcttaaaaatttgaggataaaggcaagtcctacaaacatggaa
tataaaatagttggtttaagtgaattaccttgcaaccagcaaatgtttactctgaaacaa
agaactgccaaagatgccaatggagattgtgacgctcacacgacagaaattactgtttat
gactattttgtcaaacacagaaatatagagttgaggtattccggtgatcttccttgcatc
aatgttggaaaaccgaagaagcctacttacctcccattggagctatgcaccctggtgtct
ctgcaaagatatacaaaggcattatccactctccagagatcttcgcttgttgaaaagtcg
aggcaaaaacctcaagagagaatgtcagttttgagcaatgcactgaagtacaacaactat
gatgctgatcccatgcttcaagcatgtggtgtctctatcagcgcacagtttacacaggtt
gatggccgtgtgctacaagcgcctaagttaaaagttgggaatggggaagacttcatgccc
aggaacgggaggtggaatttcaataacaagaaactttttgaggccacttgtgtagacaag
tgggctgttgtgaatttctctgctcgttgtgatatgagaaatcttgtgcgtgatctgatc
aaatgtgggaagatgaaaggaattcaagtagatgacccgtttgttgtgcttgaggagaat
ccttctatgcggagagcccctgctcctgcaagagttgaagatatgtttgagcagataaag
tcaaagcttccgggagctcccaaatttctactctgccttttatctgagcgcaaaaattct
gatgtttatggaccttggaagcgaaaatgtcttgctgaatttggaattgtgacacaatgc
attgcacctcaaagagttaatgaccaataccttactaatgttctactaaagatcaatgca
aagcttggtggaattaactcattattgctacaagagcgcatgacaaagatcccccttgtt
tctgagtcaccgacacttatactaggcatggatgtatcacacggctcacctggacattct
gatgttccatcaattgctgcggttgtaggctcacgtcaatggccttctatttctcggtac
agagcttgtgtaagaacccaaagtcctaaggttgaaatgatagattctttgtttaaacca
gcaggttctgatgatgatggcattatccgggaacttctgatagatttttacacaagctcc
ggaaaaaggaagcctgaccaaattattattttcagggatggtgtgagtgaatctcagttc
aatcaggtgttgaacatcgagctggatcaaattattgaggcatgcaaatttcttgatgaa
caatggtgccctaagtttttggtgataattgcccaaaagaatcaccataccaaatttttt
cagccaggatcacctgataatgttccacctggtactgtagttgacaacaaagtttgtcac
cctaggaattatgacttctacatgtgctctcatgcaggaatgattggaaccacacgtcca
acacactaccatgttttacatgatgagattggctttgcaccagatgatctgcaagagctt
gtgcattgtttatcttatgtgtaccagaggagtaccactgccatttctgtagttgctcca
gtttgctatgcgcacctcgcagcgtcccagatgggccagtttatgaaatttgacgacatg
tcagagacttcctcgagccatgggggggttacggctcctggggcaattcctgtgccagag
ctgccaaggctgcatgaaaaggtttgcagctctatgtttttctgctga
DBGET
integrated database retrieval system
