Asparagus officinalis (garden asparagus): 109840501
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Entry
109840501 CDS
T05243
Name
(RefSeq) serine/arginine-rich splicing factor RSZ21A-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109840501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109840501
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
SR proteins
109840501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
Motif
Other DBs
NCBI-GeneID:
109840501
NCBI-ProteinID:
XP_020264759
LinkDB
All DBs
Position
5:complement(105162712..105170023)
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AA seq
188 aa
AA seq
DB search
MTRVYVGNLDSRVTERELEDEFRVFGVLQSVWVARRPPGYAFIDFDDRRDALDAIRDVDG
KHGWRVELSHNSRGSDGGGRGGRSGRDRYGGGSDLKCYECGEPGHFARECRLRIGPGGLG
SGRRRSPSPRYRRSPSYGRRSYSPHDRSPRRRSLTPPRGRSYSRSPPYQRGGRDISPYAN
GDRRRSRS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtgtttacgtcggtaacttggattcacgagtgaccgagagggaacttgaagat
gagtttcgagtatttggagttttgcaaagcgtatgggtagccagaaggcctccaggctat
gctttcattgactttgacgaccgcagagatgctcttgatgcaatccgtgatgtggatggt
aagcatggatggagagtggagctttctcataactcgagaggcagtgatggtggtggtcgt
ggaggtaggagtggtcgggaccgttatgggggtggttctgacctcaaatgctatgagtgt
ggtgagccaggtcactttgctcgggaatgtcgtttgcgcattggtcctggtggattaggc
agcggaaggcgtcgcagtccaagtcctagataccgcaggagtcctagctatggtcgaagg
agctacagtcctcatgatcgttctccgcggcgtcgcagtttgacccccccacgtggacgc
agctatagcaggtctccaccataccaacgtggtggccgtgacatatcaccatatgccaat
ggggataggcgccgtagcaggagctga
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