Asparagus officinalis (garden asparagus): 109840576
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Entry
109840576 CDS
T05243
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109840576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109840576
03036 Chromosome and associated proteins [BR:
aof03036
]
109840576
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109840576
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109840576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
109840576
NCBI-ProteinID:
XP_020264873
LinkDB
All DBs
Position
5:107995602..108015651
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AA seq
712 aa
AA seq
DB search
MPGLASDPDNSIVPFDPNPPTPIIYPIQINLKPPISRIHINWSRGNLLHVACLRPAGDSG
EGLAGGKVVEVKLGGADDGEIGEAERRRIAYGSVPAFALLQSRRNSLMAMARMSAASFRN
EWWEHVLEYSNQISDLLGRPKLPSGSVIEDPRMVLQLVEKPTSLKAAWQLLKIFYVDRLS
SAWLPEHLVDWLADYDGLLSKTDTTIHSKLAGLQKKLVDLQVVEDDPEYWEGISLALAVG
WLDIAVKLLRLHGSYQLDQIDSRETENGLVEAVAVLVSTMPRMRPDLPTGKLGQSYKTKS
DFIKAWEKWRGHIAKLDFSTFWVQCGHHQTREGLKNLLQIMLGNIKNITNATYHWMELCI
SHLLYMRPFTMSLEGMHSLAQKCMQLKPNANSSGLTEVLLGILGDNTEVVLAECSRTFGP
WLVTHATELLSTENDEADILLHEERYNLGGISIDELHRLVYAQVLSSHPLTWQIAPTYLA
SCPKQGLGLLENLLYRQPVQHFQMILKNLEICRLYELDDISSRVMKIAGMYNWKHGKKGF
GVYWLQQAQDEVRLNKIAQRLFECIGKSVSDDSFKQWEGLIELLGSEVGSAGGLEFLHKY
RDFKRSLQQVQDGRANDVARQTVESLIQLMKSPSTPQRFWLPLLHDSVKLLNWKDRPLLS
VSETNLLMNKLQELSLAKLRPDFCDTELPPKAIGSVRLALATNLARAILEEP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcctcgcttcagatcccgacaactccatcgtccccttcgaccccaatccaccc
actcccatcatctacccgatccaaatcaacctcaaacccccaatctctcggatccacatc
aactggtctcgcggtaacctcctccatgtcgcctgcctccgccccgccggagactccggc
gaaggactcgccggaggaaaggtcgtcgaggtgaagctcggcggcgccgacgacggcgag
atcggcgaagcggagaggcggaggatcgcatatggatctgtgccggcatttgctttgctt
cagagccggaggaattctctgatggcgatggcgaggatgtcggcagcgtcttttcggaat
gagtggtgggagcatgtgttggagtacagcaatcaaatctctgaccttcttggaagaccc
aagcttccttctggctcggttattgaagaccccagaatggttttgcagttggttgagaaa
cctactagcttgaaggctgcatggcagttgttgaagatattttatgtggataggctatca
tcagcttggctcccagagcatcttgtcgattggttagcagattatgatggcctattgtca
aagacagatacaactatccactccaagcttgcagggctgcaaaagaagctggtcgattta
caggtagttgaggatgatccagaatattgggaaggaatatcactagcacttgcagttggt
tggcttgatattgcggttaaactcttgagattacatggatcctatcaactagatcaaata
gacagtcgcgagacagaaaatgggttggttgaggcagttgctgtactagtctcaacaatg
ccacgcatgcgtcctgacttgcccacaggaaaattaggccaatcttataaaaccaagtcc
gactttatcaaggcatgggaaaaatggcgtggccatatagctaaactagatttcagtaca
ttttgggttcagtgtggccaccatcagacgcgggaaggattgaaaaatttgttacaaatt
atgttggggaacataaaaaatattactaatgcaacttatcattggatggagttatgtatc
tcacacttactctacatgagaccatttactatgagtttagaaggaatgcacagtttggct
caaaagtgtatgcagttgaagccgaatgccaattccagtggtcttacagaggtcctcctt
ggtattcttggagataataccgaggttgttttagcagaatgctctagaacatttggaccc
tggttggtcacacatgccacagagttgttaagcactgagaatgatgaagctgatattctg
ctgcatgaagagagatataacttaggaggtatcagtatcgacgaactgcatcgtcttgtg
tacgctcaagttttgtcttctcatcctttgacttggcaaattgcccctacgtatttagct
tcctgcccaaagcaaggtttaggtttgttagagaatttactctacaggcagcctgtgcaa
catttccaaatgattctcaagaacctagagatttgccgtctgtatgaacttgatgacatt
agttcgagggtcatgaagattgctggcatgtataactggaagcatggcaagaaagggttt
ggagtttactggcttcaacaagctcaggacgaagttagacttaataaaattgctcagcga
ttgtttgaatgcattggaaagtcagtatctgatgacagttttaagcaatgggaaggttta
attgaattgcttggttctgaagttggcagtgcaggaggtcttgagtttctgcacaagtat
cgggattttaagagatctcttcagcaggtacaagatggaagggccaatgatgttgctagg
cagaccgtggaatcacttatacaacttatgaaaagtccctcaacaccacagagattttgg
cttccacttctgcatgattctgttaaattgctaaattggaaggatcggcctctgttgagt
gtgtctgaaacaaatttgctcatgaataaactgcaagagctatccctagcaaagcttcgt
ccagatttttgcgacactgagttgccacctaaagccataggctctgttagattggccctg
gccacgaatcttgcccgtgctattctcgaggaaccctga
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