Asparagus officinalis (garden asparagus): 109840589
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Entry
109840589 CDS
T05243
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109840589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aof02000
]
109840589
04147 Exosome [BR:
aof04147
]
109840589
04090 CD molecules [BR:
aof04090
]
109840589
Enzymes [BR:
aof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
109840589
Transporters [BR:
aof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
109840589
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109840589
CD molecules [BR:
aof04090
]
Proteins
109840589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
Zeta_toxin
AAA_29
AAA_18
ABC_ATPase
RsgA_GTPase
AAA_21
AAA_24
AAA_25
AAA_15
DLIC
DUF3487
Motif
Other DBs
NCBI-GeneID:
109840589
NCBI-ProteinID:
XP_020264891
LinkDB
All DBs
Position
5:108236577..108248481
Genome browser
AA seq
1231 aa
AA seq
DB search
MKGRMSSSKVEKEGSVKGLFRFADWYDILLMILGTVGAVGDGCSTNFLLLSASGVMNSLG
HGLQVQHQQDNGVFMPEVAKYCLYFVYTGLAVLGLAFLEGYCWSRTSERQVLRIRYKYLE
AVLRQEVGFFDSQEATTSEIINSISKDTAVLQEVLSEKVPIFLMNTSSFVSGLVFSAYFS
WRLSLVAFPLVLLLIIPGIIYGKSLVRLSRKSHGEYLKANAIVAQALSSIKTVYSFTAEK
SIVEKYAVILDKTVKLGIKKGIAKGLAVGSTGLSFAIWGFLAWYGSRLVIHYGESGGRIY
AAGVSFVLGGLSLGRALPEVKHFAEASVAANCILERISRTPEINAEDAKGLILDNIQGEV
KFESINFSYPSRPQSMILKEFNLRIPAGQSVALVGTSGSGKSTVIALLQRFYDVGEGAVK
IDGVDIKKIKLNWIREKMGLVSQDHGLFGTSIKENIVLGKPDATMDEIYAAAMTANAHNF
IRQLPEGYDTKVGERGSLLSGGQKQRIAIARAIIKNPIILLLDEATSALDSESEKLVQNA
LDQASIGRTTLVVAHKLSTIKSADQIAVVDGGTIVEIGAHDDLIRNSNSHYSRLVRLQRL
ASSMDPEPALDSYRPSSAVCSSASRLSLTKASPASFVSNEDQPIISHPAPSFFRLLSMNS
TEWKQALTGSLSAIIFGSIQPVYAFTIGGMIAAFYLQDHNKMQAIIHRYSLIFTLLSLVS
ILTNLSQHYNFAYMGEHLTRRIRLQVLDKILTFEPAWFDEGQNSSGALCSRLSNEAALVK
TLVADRVSLIVQTASGLIIAMTMGLVVAWKLALVMIAIQPLTILCYYAKKVVLSNVSVEL
ARAQNLSTQIAVEAVYNHKMVTAFGCAGKVLQLFEEAQEDPLRAARKKSWVAGIAMGCSP
CLSFMSWGLDFWYGGKLAEAGEISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGATAVA
SVFEMLDRNSLIPRSSNVSDTSENKLRKVQGRIEIKRVDFAYPSRPQCLVLRQFSLEVKA
GSSIGLVGMSGCGKSTVIGLIQRFYDVERGVVRIDGMDIRALDVIWYRGFTALVSQEPVI
FSGSVRENIAFGKPEAGEEEIVEAAKAANAHDFISSLRNGYNTDCGERGLQLSGGQKQRI
AIARSILRNPTILLLDEATSALDAQSEQIVKEALDRIMVGRTTLVVAHRLNTIKNLDSIA
FLREGKVVERGTYAQLMSKRGDFFNLASLQT
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgaagggacgtatgagctcttctaaggtggagaaggagggaagtgtgaagggattgttt
agatttgctgattggtatgatattctcctgatgattttaggaactgtaggggcagtgggt
gatggatgctcgacaaacttccttctgctctctgccagcggtgtcatgaacagcctgggg
catggattgcaggtccagcaccagcaggacaacggagttttcatgcccgaggtcgcgaag
tactgtctgtattttgtctatactggattggcagtcttggggttggcctttttggagggt
tattgttggagtaggacaagtgagaggcaggtgctgaggattagatataagtatttggag
gctgttcttaggcaggaggttggtttttttgattctcaggaagcaactacttcagagatc
attaatagtatatcaaaggacactgcagtcttacaggaggttctaagtgagaaggtgcca
atatttctgatgaacacctcaagtttcgtctcaggactagtattttctgcttacttctca
tggaggctctctctagtagccttccccctcgtcctactactaatcatccctggaatcata
tatggaaagtcccttgtccgactttctcgcaagtctcatggagagtatttgaaagcaaat
gctatagtggctcaggctctgagctccatcaaaacagtctattcctttaccgcagagaaa
agcattgtggagaagtatgcagtcattttggataagactgtgaagcttggcatcaagaaa
gggatagcgaaggggctggcagtaggaagcactgggctttcttttgctatatggggtttc
cttgcttggtacggtagtaggcttgtcatacactatggggagagtggaggaagaatttac
gcagctggggtttcttttgtcttgggcggactatctcttggaagagcactcccagaggtg
aaacactttgctgaagcatcagtagctgcaaattgtatcctagagagaatcagtcgaaca
ccagagatcaatgcagaagacgcaaagggcctgatactcgataacattcagggtgaagtc
aaatttgagagcatcaacttctcttacccatcgaggcctcagtcaatgatccttaaggaa
tttaacctcaggattcctgcaggacagagtgttgcacttgtaggcaccagtggaagtggg
aagtccactgtcattgcattgctgcagcgtttctatgatgtgggtgagggtgcagtgaaa
attgatggtgttgatattaagaagataaaattgaattggattcgggagaagatggggctt
gtgagtcaagatcatggactgtttgggacatcgataaaggagaacattgttctagggaag
cctgatgctaccatggatgagatttacgcagcagcaatgactgcgaatgcccacaatttc
ataagacagcttcctgagggatacgatacaaaggtaggggaacgtggatcgttactatca
ggtgggcagaaacagagaattgcaattgcaagagccatcatcaagaaccctataatcctt
ctccttgatgaggccactagtgcccttgactctgaatcagaaaagcttgtgcagaatgcc
cttgatcaagcttctatcggcagaacaacattggttgtagctcacaagctctccacaatc
aagagtgcagatcagattgcagttgttgatggtggcacaatcgtagagattggtgctcat
gatgatctcatcagaaacagtaacagtcactactcgagacttgtaagacttcaaagacta
gcaagttccatggatccagaacctgctcttgactcatacaggccatcttcagcagtgtgt
agcagtgcaagccgtcttagcctgaccaaagccagtccagcctcattcgtatcaaatgaa
gatcaaccaatcatctcccatcctgccccatccttcttcaggcttctctccatgaactca
acagagtggaagcaggctctaaccggtagcctctcagcaataatctttggttcaatacaa
ccagtctatgccttcacaattggtggcatgattgcagcattctatctccaagaccacaac
aaaatgcaagccataatccatcgttactctctaattttcaccttactttctcttgtttcc
atcctcactaatctctcccagcattacaattttgcttacatgggcgagcatctaaccaga
aggatcagactccaagttcttgacaaaatcctaacatttgaacctgcctggttcgatgaa
gggcagaactcgagtggtgcattgtgttcgaggctcagcaatgaagccgctctggttaag
actcttgttgcagatcgtgtatctttaatagtacaaacagcatcaggacttatcatcgcc
atgacgatggggctagttgttgcgtggaaacttgcattggtcatgatagctatccaacca
ttgaccatcttatgctactatgctaaaaaagttgttctgtctaatgtttcagtagaatta
gctagagctcagaatctaagcacgcagatcgcggtagaggctgtttacaatcacaaaatg
gttactgcatttggatgtgcggggaaagttcttcagctatttgaagaagctcaggaggat
ccattaagggcagcgaggaagaaatcatgggtggcagggattgcaatgggatgctctcct
tgcttatcctttatgtcatggggactagatttctggtatggagggaaactggctgaggcc
ggagagatatcagccggggatgtttttaagaccttcttcatcttagtgagcacagggaag
gtaattgctgaagcgggaagcatgacttcagatcttgctaaaggagcaacagcggttgct
tctgtgtttgagatgttggacaggaacagcctaatccctcgttcttctaatgtgagtgat
actagcgagaacaagttacgaaaagtacaagggaggatcgagatcaagagagtagacttc
gcatacccaagtcgaccacagtgtttagtgctgcgacaatttagcctagaagtgaaggct
ggctcgagcattggactagtcgggatgagtgggtgtgggaaatcaacagtcattggattg
attcagaggttctatgacgttgaaagaggtgttgttagaattgatgggatggacataaga
gcgttagacgttatttggtatcgaggattcactgctcttgttagccaagagccggttata
ttttcaggcagtgttcgggagaatatagcttttgggaagccagaagcaggtgaagaggag
attgtggaggctgcgaaggcagcaaatgcgcatgatttcatatcatcgctgagaaatgga
tacaacacggactgcggagagagaggactacaactatcaggaggccaaaaacaaaggatt
gcaatcgcaagatccatcttaaggaatccaacaatactactactcgacgaagccacaagc
gctcttgatgcccaatccgagcaaatagtgaaggaagctcttgacagaatcatggtcgga
aggaccaccttagtagtggctcatcgcctcaacacgatcaagaatctggattctatcgcc
tttcttagagaagggaaggttgtggaaagaggaacttatgcccaacttatgagcaagaga
ggagacttcttcaatcttgctagtcttcaaacgtaa
DBGET
integrated database retrieval system
