KEGG   Asparagus officinalis (garden asparagus): 109840603
Entry
109840603         CDS       T05243                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aof03036]
    109840603
   03400 DNA repair and recombination proteins [BR:aof03400]
    109840603
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109840603
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109840603
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2 UTP20_N RIX1
Other DBs
NCBI-GeneID: 109840603
NCBI-ProteinID: XP_020264905
LinkDB
Position
5:complement(108408615..108437095)
AA seq 1159 aa
MAKTNSWISHIEAFVDASCSSNQQKLGSFHELIIIPVDQNASVDAIAALVKNDSLTLEDL
VREMELYLTTTDNIIRARGTLLLGEVLSHLTAKPLSSTIISSLVGFFTSRLADWQALRGT
LVGCLALLRRKSNVGMVVGNEAKMLAENYLANVQTQSLAVHDRKLCFEVLQCLLDVYPEA
VMDLDDELIRGILDAIDGEKDPRCLILTFHIAETLMRLFPDQSKSEESFAEEIFEILSCY
FPIYFTHQKVDDLQIKRDDLSRELMNAFCSTPYFEPFAIPLVLDKLSSSLPLAKLDSLKY
LSNCILHYGADRMFKHAKDIWFALKDVIFDFSPEGIIESAGDMESQKAQIAKEALTCLQM
AVSQLNFVNSEPFTSLILDDPDIERIFLSVCLERSYSGIPKETLHQLNSIGSILSIASKV
SIDGCSKVFQKFFPRLMNLLGVDKNDSSYGCIKDCNTSSNLNFGALYLCVEFLDSCRDLT
IGLQDIPPQAPDSWCYLLKDFCGPLSYAFKSSLVNTVTAAKTGQEYVPCVVKGLQVLATF
PGCHSPVSEKIYEDILAVLMSVITGRFDEPFLWRTALEALIQIGLHIEKFHDSKKERGYC
KFVVERIVSMLLHDDTTSLGVKLEVISEIGTAGPDFMSTVIRGLEDVIFSNFSEIWVNGN
LGAAEILVPLLQCYSNRVLPWCHKFGKADQVAMQFATNIWNLMEKSSVLSVEFQRNGVLD
TTMMVMKLCVGYCTEENQSIIVRKAYTILSSTTFLLLDSLGLPLSNLEALQSIPDISGLS
CKDEWLISLFASVVIVLHPQTPVPDVGALTRLFTVFLLKGHLPAAQALASMINKWPANIG
TAELSSTHELEVVIDVVLESISAVLSSCLKECKIANGTDDNLSCSSLISYQIHAIVGLAW
LGKSLLMRGHDKVKEIAKRLLKCLLSDQDIPATSVAKDEARDNDQNMHSLLIRAAADAFH
ILLTDSEVCLNRKFHATMRPLYKQRFFSSMMPVLLSSIKESNSSRTRAILYRALGHIFSD
TPLAAVVAEAKKVIPALLEGLSISTLGVSNKEMTYNLLLVLSGILMDENGKEAIVENAHT
IINHLIRLVSYPHMMLVRETAIQCLTAMSSLPHTRIYPMRPQVLRALVMSLDDPKRHVRQ
EAVRCRQAWASIASRSLHF
NT seq 3480 nt   +upstreamnt  +downstreamnt
atggcgaaaacaaactcatggatctcccacatcgaagccttcgtcgatgcctcttgctct
tcgaaccagcagaaacttgggtcttttcatgagttaataataattcctgtggatcagaat
gcaagtgtggatgcgattgcagcgttggtgaagaatgactcattaactctcgaggatttg
gtaagagaaatggagctttatttgacaaccacggacaatataatccgcgcaagaggaact
cttcttctgggagaagttcttagtcatcttactgcaaagccattaagtagtaccattata
agcagtttggtaggatttttcacttcaaggctggcagattggcaagctctgcgtgggacc
ctcgttggttgcttggctcttctgagaagaaagagtaatgttggaatggttgtaggcaat
gaggcaaagatgcttgcagaaaattatttagctaatgtccaaactcagtctttagcagtg
catgaccgtaagttatgctttgaagttcttcagtgcttattggatgtctaccctgaggct
gtaatggatctggatgatgagcttattcgtggaatcctggatgcgattgatggggaaaag
gatcctcgatgcttgattctaacattccatatagcagaaactctaatgcgactatttcca
gatcaatctaagtcagaagaaagctttgcagaagagatttttgagattttaagttgctat
tttcctatatatttcacacatcaaaaagttgatgatcttcagataaaaagggatgatctt
tctagggaactaatgaatgccttctgttcaactccatacttcgagccatttgccattcct
ctggtgctcgataaactttcctcgtctcttcctctagcaaagcttgattctttgaagtat
cttagcaattgcatattacattatggagctgatagaatgtttaagcatgctaaagatata
tggtttgctctgaaagatgtcatctttgatttttcaccggaaggaattatagaatcagca
ggagatatggaatcacagaaagctcaaattgcaaaagaggccctcacttgtttgcaaatg
gctgtttcacagttaaacttcgtcaatagtgagccatttacaagcttgattcttgacgat
ccggacattgagagaatttttttgtctgtgtgcctggaaagaagttattcaggcatcccc
aaagaaactctgcatcaacttaattctattggaagcatcttatctattgcttcaaaggtc
tctattgatggttgcagtaaagtgttccagaaattttttccacgcttgatgaatttatta
ggagtagataaaaacgattcatcttatggttgcattaaggactgcaacacatcttctaat
ttgaattttggagctctatacttgtgtgttgaattccttgattcctgtagagatttgact
attgggcttcaggatatccctccacaagctccagacagctggtgttatctgcttaaagat
ttttgtggtccattaagttatgcttttaaatcatctctggtgaatactgttactgctgcg
aagaccgggcaagaatatgtgccttgtgtagtaaagggtttgcaggtacttgcaacattt
ccaggatgtcactcacctgtatcggagaaaatatatgaagatattttagcagtccttatg
tcagttatcactggcaggtttgatgaaccattcttgtggagaactgctttggaggcatta
attcaaattggtttacatatagaaaagtttcatgactctaagaaggaaagaggctattgt
aaatttgtagttgaaaggattgtttctatgcttttacatgatgatactacatctcttggt
gttaaactagaagtaatctcggaaatcggtactgctggtccagactttatgtcaacagtg
atacgaggtcttgaagatgttatattctccaatttctcagagatttgggtcaacggaaac
ctaggagctgctgagattttagtacctctacttcagtgctactctaatcgcgtgcttcct
tggtgccacaagtttggaaaagctgaccaagtcgcaatgcaatttgctaccaatatttgg
aatctgatggaaaagagtagtgttctcagtgtagaatttcaaaggaatggtgttcttgat
acaactatgatggtgatgaagctttgtgttggatattgtacagaagaaaaccagagtatt
attgtacggaaagcttatactattctatcatctactacctttcttctgttggactcttta
ggcttgcccttatccaacttagaagcgctgcagtcaattccagatatatctggcttatcc
tgtaaagatgagtggcttatatctctgtttgcatcagtagtgatagtgctacatccacaa
acacctgtgccagatgttggagcactaaccagattgttcacagttttcctacttaaaggt
catctcccggcagctcaagctttggcttcaatgattaacaaatggccagcaaatatcggt
acagcagaactttcaagcactcatgaactggaagtagtaattgatgtggttcttgagagt
atatcggcggtactttctagttgtttaaaagaatgtaaaattgccaatggcactgatgac
aacttgagttgttcaagcctcatttcttaccaaatccatgccattgttggcttggcatgg
cttggtaaaagtttgcttatgcgtggacatgacaaggtgaaagaaatagcaaagcgtcta
ttgaagtgcttactctctgatcaggatattcctgccacttcagtagccaaggatgaagct
agagacaatgatcagaatatgcattcccttttgatcagagctgcagcagatgcatttcat
atccttcttactgattcagaagtttgcttgaatagaaaatttcatgcaacaatgaggcca
ctttataaacaacgattcttctcaagcatgatgcccgtcttgctctcttcaatcaaagaa
tccaattcatcaagaacaagagctatactgtatagagctcttgggcatattttttctgac
actccgttagctgctgttgttgccgaagcaaaaaaggttatacctgcattattggagggc
ttatctatatctactttgggagtatcgaataaagaaatgacatataaccttttattagtc
ttgtcagggatactaatggatgagaatgggaaggaagctattgtagagaatgctcatact
attataaatcacctcattcgactggtttcttatcctcatatgatgcttgtacgggaaaca
gcaattcaatgtcttacagcaatgtcatcacttcctcacacaaggatttatcccatgaga
ccgcaggtcctaagagctttagtgatgtcccttgatgatccgaaaagacatgttcgtcaa
gaggctgttagatgtcgtcaagcatgggcatcaatagcttcaagaagtcttcatttttga

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