Asparagus officinalis (garden asparagus): 109840667
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Entry
109840667 CDS
T05243
Name
(RefSeq) protein SPA1-RELATED 2-like
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109840667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109840667
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
109840667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Pkinase
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_NUP159_NUP214
Beta-prop_WDR90_POC16_2nd
PK_Tyr_Ser-Thr
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
109840667
NCBI-ProteinID:
XP_020264985
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Position
5:complement(110405988..110418053)
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AA seq
973 aa
AA seq
DB search
MEGSADVSVSEPVEHSVAAPHIKRKENDEQLPQQRDTDNALENADQVTIPRSPENFMETL
AGKDLSHDQGSASDPGMMVEELTLNNYKSPILFKGEGSSVKKGFWNNFTRLAGEPRSRDA
SLRSSSIGYREGVGSLFMPQMSMRRPPGSTQLEPSPSKVADHLAESDHRIASRSMLDKPV
EGIRTKVLPASGFSQFLVKNSLRRKGVAYKHPGIRKEPWGVTQSRNNLARSSNDAEVDTH
SSEKPSGKHDDKTLIGGGGQADTRHDEISLREWLTPRLHKLDKFERLQMFKQILELVDSS
HSQGLILQCLRPTYILISPSNQVKYVGAFVPRSQMEQLEGQHNQNIENYLEPHLKRKKYW
WHDDNSSSSMHQKLGESYKPHVLSGGSALQQPTLEFLKLEEKWYASPEELNMGTCSFSSN
IYGLGVLLFELFCYFDTWELHSAAMSDLRYRILPPNFLSESPKEAGFCLWLLHPESSSRP
NSRDILLSNFVSEGQDMLSPDDSAAIDEEDAEADLLFHFLLSMKEQKEKQAAKLEADVQR
LTGDIEEVERRRPAHGEGTSWFSTSILKEERLIGNLDQLENAYFSMRSKIEPSESDSVSR
SDSDVLRIRNGRFQVQNDTDLWKEPTDSLGSFFEGLCKYARYSKFELCGSLRSVDILNSA
NVICSLSFDRDEDYFAAAGVSKKIKIFEFGALLNDSVDIHYPLIEMSNRSKLSCVCWNNY
IKNYLASTDYEGVVQLWDASTGQGFTQYIEHQKRAWSVDFSIVDPTRLASGSDDCSVKLW
SINERNCTDTIRNVANVCCVQFSPYSSHLLAFGSADYKIYCFDLRMTRVPWCTLGGHGKA
VSYVKFVDSVTAVSASTDNSLKLWDLNKTNPSGLSTNACSLSFSGHTNEKNFVGLSVSDG
YITCGSETNEVYAYYRTLPMPITSHKFGSTDPITGQETDDDNGQFVSSVCWRERSKMVIA
ANSAGTIKLLQMV
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggaaggatcagctgatgtaagtgtaagtgaacctgtggagcactcggtcgcggctcct
cacattaaaagaaaagagaacgacgaacagctccctcagcaacgagatacagacaatgct
ttggagaatgcagaccaagttacaattccaaggtcgccagagaattttatggaaacctta
gcaggaaaggatctaagtcatgaccagggttcagcatcggaccctggaatgatggtggaa
gagctgacattgaacaattacaagagcccaatcttgtttaaaggcgaaggttcctcagtt
aagaaaggtttctggaacaattttacaaggttggctggtgaaccgagaagtagagatgca
tcattgagaagttcatctataggatatcgggagggcgtagggagtttgtttatgccacaa
atgtcaatgagaaggcctccaggatccactcaattggagccaagtccttctaaggtagct
gatcatttagctgaaagtgatcaccgcattgcttcaagaagtatgcttgacaaacctgtg
gaagggatccggacaaaggttttaccagcatctggtttttctcagtttttagtaaagaat
tcattgaggagaaagggggttgcatataaacatccaggaattcggaaggagccttggggt
gtaacccaaagtcgaaataatctagcaaggtctagcaacgatgcagaggtggatactcat
tcatcagagaagccaagtggaaaacatgatgacaaaactttgattggaggcggtggtcaa
gctgatacccggcatgatgagattagtttgagggaatggttgaccccaaggcttcacaag
ttggataaattcgagaggcttcagatgttcaaacagattttagaacttgtagattcctca
cactcccaaggacttattttgcagtgtctacgtccaacatatatattgatttcaccttca
aatcaagtcaaatatgtcggtgcctttgtccctagaagtcagatggagcaactggaaggt
caacataatcaaaatattgaaaattatttagagcctcatttgaaaaggaaaaagtattgg
tggcacgatgacaacagttcatcaagcatgcaccagaaactcggtgaatcatacaaacct
catgtgctttctggtggttctgctctccaacaaccgacattggagtttttgaaattggaa
gaaaaatggtatgctagtccagaggaactaaacatgggcacttgctcgttttcttccaac
atctacggtcttggggttcttctttttgagctgttttgctactttgatacttgggaactg
cattctgctgcaatgtctgaccttcgctacagaatacttcctccgaattttctatcagag
agccctaaagaggcaggattttgcctttggttgctacatccagagtcttcttcgcgacct
aattcaagggatattcttctctcgaacttcgtgagtgaaggtcaagacatgttatctcca
gatgactcagcagctattgatgaagaggatgcagaggcagatttgttgtttcatttcttg
ttaagcatgaaggaacaaaaggagaagcaggctgccaagttagaagctgacgtccagcgc
ttaacaggagatattgaggaggtcgagagaaggagacctgcacatggtgaaggaacatcc
tggttttccacgtcaattctaaaggaggagaggctgatcggaaatcttgatcaacttgaa
aatgcatacttttccatgagatccaagattgagccttctgaaagtgattctgtgtctcgt
tcagattcagatgttctgagaatccgcaatggaagatttcaggttcaaaatgacactgat
ctatggaaggaacctacagattctcttggttccttttttgaaggtttatgcaagtatgct
cgatatagtaaatttgaattatgtggaagcctaaggagcgtagatatcctcaactctgca
aatgtcatttgctctttaagttttgatcgagatgaggactactttgctgctgcaggcgtt
tcaaagaaaattaaaatctttgaatttggtgctcttttgaacgatagcgttgacatccat
tacccattgattgagatgtctaatagatccaagctcagttgcgtctgttggaacaactac
attaagaactatttagcttcgacagactatgaaggtgtggttcagttatgggatgcgagc
acagggcagggattcacacaatacatagagcatcagaagagagcctggtctgttgatttt
tctatagtggatccaactaggctggctagtggaagtgacgattgttcagtgaaactctgg
agcattaacgagagaaactgcactgatacaatcaggaatgtcgccaatgtttgttgtgtc
caattctcaccatactcttcccatttgctggccttcggttcagctgactacaaaatatac
tgttttgatctacggatgaccagagttccctggtgtactttgggtggacacgggaaagcc
gttagctatgtaaagtttgtagattctgtaacagctgtgtctgcatccactgacaacagc
cttaagctttgggatcttaacaaaaccaatccaagtggtttgtcgaccaatgcttgcagt
ttgagcttcagtggtcacaccaatgagaagaacttcgtaggtctgtctgtttctgatgga
tatataacctgtggttcagaaaccaatgaagtttatgcttactacagaactcttcccatg
ccgataacttctcacaagtttggctccacagatcctattacagggcaagaaaccgatgat
gataatggacaatttgtttcgagtgtctgctggagggaaaggtcaaaaatggtgatagca
gcaaactcagctggaaccataaaacttctgcaaatggtttga
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