Asparagus officinalis (garden asparagus): 109840745
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Entry
109840745 CDS
T05243
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109840745
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
109840745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG1-like_MIT1
DUF6694
Motif
Other DBs
NCBI-GeneID:
109840745
NCBI-ProteinID:
XP_020265085
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All DBs
Position
5:complement(113506711..113515380)
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AA seq
1100 aa
AA seq
DB search
MARSSRHKSHRSHKHRDRSESEDEGSSRDRKMKVAEEESARVSRVSDQEKRKSSSKDGVG
TSNGDVSGDYGKKRKDRDEDSAIVGDRWNGGGDDDARVEKESKKEGSDAANLEKSSKSKS
LGGDSKGKSNSSRRREGSSEKNEEKRRLEKESSRRESSSSRCKDEKEKDKDRERERGSEK
DKKDQDFKHERSDDRAARREERSVKPGIEISELQDEMHNPDIEKESDKRSKRRRGGSGDL
DRLDDGRKGDGRQESSRVEHSKNGSYKDGRYKEKYREELDKEKYREELDKEKYREELDKE
KYREELDRDQRHHDYKRKDERSSRAHTSERSDSKHYRDDRDSTRRVDDEKTKLHDSDRGG
SRRVDDNSTKLKDNRGRKRSSAEIEDQNDMKSRSAKEPREDGNKNGSSSSKFDSRSDRAR
LEHPHSDRVDSSLSNSRTKNSPNASAYSSKDQIRHNSSPASRDHSASGGRERISGSRSSE
KAKLKDNIHSDAFIADGGSFLHHDRVPRSDTRSSPSQLREKSPTSERRSERITSRRSLDM
EEGGQRSSSSSKGKKGDSSFHANVREREYLAEKPSEADSSQVELFKREHVSVGSSSSRAA
QLQGSSPGHLPPPPPVRIGVDSPSVLGSYEDDTRSQNGERKINTRYKRGGDSTIGRGPGT
PWKGPPTWPSPVANGFMPLQHGPSAGFHPGIQQFPAPSLFGMRPPMDLNNPSYHIHEGNR
FPGHVRPFGWHNAVDDCPPHLQVWDGNANVFGDESHIYGRQEWDQNRHLLSSRGWEMSTD
MWSRQNANANIDRPAPWKEDEYSRQAQVDEASVGNLGHNSRDEKARSEQPVADASGIKLP
SDSSLAKRSVRASSKSPSDKTPELSKMPGLNGTSEKQSGSDVLCCTYLSKLDISPDLVKP
ELYKQCISLMEGRERDVTDNFSIQGRRKNNVERLRLVAKSEQKVHKSLFPTASETTFRRA
MSLYKKQMEAMKEAMHIALPLVCSEQQNNSPESNNENVTAKSMDHVEGSLPTNLEEDNNT
VAADGGEGDKNPSDPEEQPGDKPSDNKAQQVEISVAAEEKGFVKNSDAVISVEGSKQSEA
IIPECRANLSRIHLSPESTH
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagttcccgtcacaaatctcaccggtctcataagcacagggatcgttcggaa
tctgaagacgaggggagttctagagacaggaagatgaaggtggcggaggaagagtccgct
agggtttctagggtttcggatcaggagaagaggaaatcttcgtctaaagatggagttggg
accagcaacggcgatgtatcgggggattatgggaagaagcggaaggatagagacgaagat
tcggccatcgtcggagataggtggaatggcggcggagatgatgatgctagggttgagaag
gagtcgaaaaaggagggatctgatgcggcaaatttggaaaagagttcaaaatcaaagtct
ttaggtggggattcgaaggggaagtctaatagtagcagaagacgtgagggttcgagtgaa
aagaacgaggagaagaggaggttagagaaggagagtagcaggagagagagtagcagcagt
cgttgtaaggatgaaaaggagaaggataaggatagagaaagggagagaggatcagagaaa
gacaagaaagatcaggattttaaacacgagaggtctgatgatagagcagctagaagagaa
gaacgttctgtaaagccgggaattgaaatttctgagctacaggacgagatgcacaatcct
gatatagaaaaagagtctgacaaacggagtaaaaggagaagaggaggatctggtgaccta
gaccgactagatgatggaagaaaaggtgatggtagacaagaatcttctagagttgaacac
tcaaaaaatggaagctacaaagatgggagatacaaggaaaaatacagggaggagcttgac
aaggaaaaatacagggaggaacttgacaaggaaaaatacagggaggagcttgacaaggaa
aaatacagggaggagcttgacagggatcagaggcaccatgactacaagcgcaaagatgaa
cgctcctcaagagctcacactagtgagaggtctgacagtaagcattatagagatgatcgt
gatagcactcgtcgtgttgatgatgagaaaactaagctgcatgacagtgatcgaggtggt
agtcgccgtgttgatgataatagcaccaaacttaaagataacagaggaaggaaaaggtct
tctgctgaaattgaagaccagaatgacatgaaatctcgaagtgcaaaagaaccacgtgaa
gatggtaataaaaatggatcaagttctagtaaatttgattcacgctctgacagagctagg
cttgaacatccacattctgacagggttgattcttccctgagcaatagccgaactaagaat
tctcccaatgctagtgcttatagtagcaaggatcagattaggcataactctagcccagct
tcaagagaccactctgcttctggaggtcgagagagaatatctggatctcggtcttcagaa
aaagccaagttgaaggataacatccattctgatgcattcatcgcagatggtggttctttt
cttcatcatgatagggtcccaagatcagatactcgttcttctccaagccagttgagagaa
aaatcccctacatctgaacggcgatcggagagaattacttcccgtcgcagccttgatatg
gaggaaggtggccaaagaagtagtagcagttccaagggaaaaaagggtgattcttcattt
catgccaatgtcagggaacgtgaataccttgcagagaagcccagcgaggctgattcttct
caggtggagcttttcaaaagagagcatgtttcagtgggatcatcctctagtagagctgcc
cagctacaaggtagttcacctggacatctcccccctccaccacctgtaaggattggagta
gacagtccatctgtattaggctcttatgaagatgatactagaagtcagaatggggagcgt
aaaattaacaccagatataaaaggggcggtgattccactataggaagaggtccaggaact
ccttggaaaggtcccccaacttggccatctccagttgcaaatggcttcatgcccctccaa
catggaccttctgcaggctttcatccaggcattcagcagtttcccgctccatcgctattt
ggtatgaggccacccatggacttgaacaacccttcctatcatattcatgagggcaatagg
tttcctggtcatgtccgtccttttggatggcataatgcagttgatgactgtcctcctcat
ttgcaagtgtgggatggaaatgccaacgtgttcggtgatgaatcccatatctatggtagg
caggaatgggatcagaacaggcatttgttgagcagcagaggatgggaaatgagtactgat
atgtggagcagacagaatgctaatgctaatatagatcgccctgcaccgtggaaggaagat
gagtattctcgtcaagctcaagttgacgaagcttcggtcgggaatttggggcataattct
cgtgatgaaaaggctagatcagagcagcctgttgctgatgccagtggcatcaagctacct
agtgattcatccctggcaaagcgatctgtcagagcttcttcaaaatctccatctgataag
acacctgagctttctaaaatgcctggtttaaatgggacttctgaaaagcagagtggtagt
gatgttctttgctgtacttatctttccaagcttgacatatcacctgatcttgtcaagcca
gagttgtataaacagtgcatctctttgatggaaggtagagagagagatgttacagataat
ttttcaatccagggacgaagaaagaacaacgtagagcgtctcagattggtggcaaaaagt
gaacagaaagtccataaatctctctttcctacagcttcagaaactacctttcggagagcc
atgtccctttacaaaaagcagatggaagcaatgaaagaggcgatgcatattgcattaccc
ctggtgtgttctgaacagcagaataattctcccgaatcaaacaatgagaatgtgactgcc
aagtccatggatcatgtggaagggagtttgcccacaaacctggaggaagacaataacaca
gttgctgctgatggaggcgaaggcgacaaaaaccctagcgaccctgaggaacaaccgggc
gataagcctagtgataataaagcacaacaagttgagatttctgttgctgctgaggagaaa
gggtttgttaagaattctgatgctgttatatctgttgagggttccaagcaaagtgaggct
ataatcccagaatgtagggctaatttaagtcggatacatctctctcctgaaagtacacat
tga
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integrated database retrieval system
