Asparagus officinalis (garden asparagus): 109840795
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Entry
109840795 CDS
T05243
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109840795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109840795
Membrane trafficking [BR:
aof04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109840795
Hops complex
109840795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
109840795
NCBI-ProteinID:
XP_020265158
LinkDB
All DBs
Position
5:complement(115047219..115068744)
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AA seq
618 aa
AA seq
DB search
MAVSQNGKYLAMFTHDGRLLVVLTDFSRIIFEYTCETTLPPEQIAWCGLDSVLLYWDEML
LMVGPNGDPVRYMYDEPIILISECDGVRILSNSTMEFLQRVPDSTVSIFQIGSTEPGALL
YDALDHFDRHSAKADENLRSVRSKLPQAVEACIDAAGHEFDVSRQRTLLRAASYGRAFCS
QFPRERFPEMCRTLRVLNAVRNHEIGIPLSIQQYKLLTAPVLVGRLTNGNHHLLALRISE
YLNLNIEVVIRHWACTKITASSSIDDIALLDILLEKLKLCKDISYAAIAGHADKSGRRKL
AAMLVDHEPRAVEQVPLLLSIGEEDSALGKATESGDTDLVYLVLFHIWEKKQPIDFFGTI
NARPLARDLFITYARHHDRKSLEDFFLSTGRPQDVAYLLLEESWELERKPMATRGSALQG
PRIRLIEDAQKLFSQTKEHAFEAKAAEEHAKLLRLQLDLEASTKQAIFVGSSISDTIRTC
IVLGNERAAMRVRAEFKVSEKRWYWLKAFALATARNWEALEKFSKEKKPPGGFKPFVEAC
IDAEEKTEALKYIPKLTDPGDKSQAFARIGMDKEAADAAAQAKDSELFGRWKLNLAQNSG
TASILDTLRDRLSFQGVY
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcgcagaatgggaagtatttggctatgtttactcatgatgggaggttgctt
gtggtgttgaccgatttttcgagaatcatttttgagtatacttgtgagacaacattgccg
ccggagcaaattgcttggtgtggactggacagtgtgttgctctattgggatgaaatgctt
ctgatggtgggccccaatggcgatccagtgcgctacatgtatgatgaaccaattatactt
atttcagagtgtgatggggtaagaatcctttctaactcaactatggaattcctacaacga
gttcctgattcaacggtctcaatcttccaaattggaagcaccgaacccggagctttgtta
tatgatgctttggatcacttcgacagacacagtgctaaggctgatgaaaacctaagatct
gtgcgctctaagttgccacaggctgttgaggcttgcatagatgctgctggacatgaattt
gatgtctcacgccaaagaaccttactgagagctgcaagttatggtcgggccttttgcagt
cagttcccacgtgaacgctttccagagatgtgcagaacattgcgagtgctaaatgctgtt
cggaatcatgagattggtattccccttagcattcaacagtacaagttgcttacagcacca
gttcttgttgggagattgactaatgggaaccatcaccttctggctttgaggatctctgag
tatcttaacttgaatatagaggtggttatcaggcactgggcttgtacaaagataacagca
tcatcatctatcgatgatattgcacttttagatatccttctggagaagctgaaattatgc
aaagatatatcatatgccgccattgctggtcatgcagataagagcggacgaagaaagttg
gctgcaatgcttgttgatcatgaaccacgggcagttgaacaggttcctttgttgctaagc
attggggaggaagacagcgctttgggaaaggcaactgaaagtggtgatactgatcttgtt
tatctggttcttttccacatatgggaaaagaagcaaccaattgatttttttggaacaata
aatgctagacctctagctcgtgatttgtttattacgtatgcaaggcatcatgatcgtaaa
tccctagaggattttttcctatcaactggccgtccccaggacgttgcttacctcttgttg
gaggagtcatgggaattagaaaggaaacctatggctaccagaggatctgccctacagggt
ccacggataaggcttattgaggatgctcaaaagcttttctctcagaccaaagaacatgca
tttgaagcaaaagctgctgaagagcatgccaaattgttgagattgcaactggaccttgaa
gcatcaacgaagcaggctatttttgttggttccagcatcagcgatacaattagaacatgt
atcgtactaggcaatgaacgagcggcgatgagagtgcgggcagaattcaaggtgtcagag
aagagatggtactggctaaaggcatttgcactggctacagcgaggaattgggaggctttg
gagaagttctccaaagagaagaaaccaccgggtggttttaaaccatttgtggaagcatgc
atcgatgctgaagaaaaaactgaagctctcaaatacattccgaaactcacagatcctgga
gataagtcacaggcctttgcacgcattggtatggataaggaagctgcagatgctgcagct
caagctaaggacagcgaattatttggccgctggaaattgaatttagcccaaaattctggc
actgcctccattttggatactctgcgagatcgcttatcttttcaaggtgtttattaa
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