Asparagus officinalis (garden asparagus): 109840824
Help
Entry
109840824 CDS
T05243
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109840824
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aof01009
]
109840824
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109840824
03036 Chromosome and associated proteins [BR:
aof03036
]
109840824
Protein phosphatases and associated proteins [BR:
aof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109840824
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109840824
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109840824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
109840824
NCBI-ProteinID:
XP_020265192
LinkDB
All DBs
Position
5:115630550..115646213
Genome browser
AA seq
503 aa
AA seq
DB search
MEPPPPSPALEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERT
DVKDHGSRREQEKSDYPIRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGA
LFLLSTNDKTIKYWKVQEKKVKRVSEVNVDPSQGNGSMGSPSTSNSRGHLPNGGCLERPS
GYLSNDFSFPPGGFPSLRLPVVVASQETSLAARCRRIYAHAHDYHINSISNNSDGETFIS
ADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLI
DLRQSALCDNHSKLFEEHEAPGSRSFFTEIIASISDIKFGKDGRHILSRDYMTLKLWDIN
MDSGPVATFQVHEYLRPRLCDLYENDSIFDKFECCLSGDGQRVATGSYSNLFRVFGCAAG
STEATTLEASKNPMRRQVQTPSRPARSLTSLTRVVRRGGAESPGLDANGNSYDFSTKLLH
LAWHPTENSIACAAANSLYMYYA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagccgccgccgccgtcgccggcgctggagtggaaattctcgcaggtcttcggcgag
aggacggccggcgaggaggttcaagaagttgacattatttcagctatagaatttgacaaa
tctggagatcatcttgctactggagatagaggaggacgtgtagttttatttgaaaggaca
gatgttaaggatcatggttctcgaagggaacaagaaaagtcagattatccaatcaggcat
ccagaattccgttataaaacagaattccaaagccatgaacctgagttcgattaccttaaa
agtttggaaatagaagagaagataaataagatccgttggtgccagacagcaaatggtgca
ctctttctcctctccacaaatgacaaaacaatcaaatactggaaggtgcaagagaagaaa
gtgaagagagtttctgaggtgaatgtggacccttcacaaggaaatggcagcatgggtagc
cctagcacatctaattctagaggacatcttccaaatggtggatgtttggaaaggccatcc
ggttatttgagcaatgacttctcatttcctcctggaggatttccatctttgcggttacct
gtggtagtagccagccaggagacaagccttgctgctagatgtcgaagaatatatgctcat
gctcatgattatcacatcaattccatttcgaataacagtgatggtgagactttcatatca
gctgatgatttgcggattaacctttggaatttggaaattagcaaccagagtttcaacatt
gttgatgtgaagcctgcaaatatggaggatctaactgaggtgataacatccgcagaattc
caccctacccattgtaatacattagcatatagtagctctaagggctcaatacggcttatt
gatttgcggcaatcagccttgtgcgataaccactctaagctgtttgaagagcatgaagcc
ccgggttcaagatcattttttactgagatcattgcttcaatttcagatattaaatttggg
aaggatgggagacacattctgagccgtgattacatgactcttaagctgtgggacataaac
atggacagtggtccggttgcaacgttccaagtccatgaatatttaaggcctaggctatgt
gatttatatgaaaatgattcaattttcgacaaatttgaatgctgtcttagtggagatgga
cagagagtagccactggttcatatagcaatctttttcgtgtatttggttgtgctgctgga
agcactgaggcaacaactttggaagcaagcaaaaatcctatgaggagacaagttcagaca
ccttcaagacctgcaagatctttgaccagtctaacacgggttgtcagaagagggggagct
gaaagcccaggactggatgcgaatggaaactcatatgacttctctaccaaattactccat
ttggcatggcacccaacagagaactcaattgcctgtgctgctgcaaacagtttgtacatg
tattatgcatag
DBGET
integrated database retrieval system
