Asparagus officinalis (garden asparagus): 109841074
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Entry
109841074 CDS
T05243
Name
(RefSeq) protein argonaute 16-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109841074
03036 Chromosome and associated proteins [BR:
aof03036
]
109841074
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109841074
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109841074
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109841074
microRNA pathway
RISC loading complex
109841074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
109841074
NCBI-ProteinID:
XP_020265526
LinkDB
All DBs
Position
5:123028605..123038485
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AA seq
947 aa
AA seq
DB search
MASPEDGPRRESLPPPPPVVPPNAVPTKADQPKIPVMPEPPKRHPMVRPGVGTDGRRLKL
LSNHFAVKFSAHEAVFYHYSVTIKSDDKRAVEGKGIGRKVMDKLYQTYSSELAGKNFAYD
GEKSLFTVGALPHNNFEFTVLLEESSARVAGGSPAHGSPSEGDRKRSKRSHQAKTFKVEI
SYAARIPMKSIAEAIQGRDAEHTQDALRVLDIILRQQQAKRGCLLVRQSFFSGEHTNYTN
LGGGVTGCRGFHSSFCTTNGGLSLNMDVSTTMIMTPGPVVNFLRENQNVREPHQIDWAKA
KRMLKNMRIRTTHSNMEFKIIGMSELPCNQQLFPMKVRNGREEGRTINVTVFDYFSRDKK
IELTWSAYAPCLDVGKPKRPNYLPVELCNLVPLQRYTKALSSQQRASLVEKSRQKPLERI
RVVTDAVRNNRYDEESMLSSCGISIDKQLIRLDGRVLTAPTLKVGNEEDCVPRNGRWNFN
NKTLCEPTNIERWAIVNFSARCDMSHLSRELINCGMRKGININRPHALIDEDRRCMRLQP
FVRVEKVFEKVMASLPGPPQFLLCVLSEKKNSDVYGPWKRKNLADMGIVTQCIAPTKIND
QYLTNVLLKINSKLGGINSVLAVERSLRIPLVTEIPTLILGMDVSHGSPGRADIPSIAAV
VGSRQWPLISRYRASVRSQSPKLEMIDCLYKPHSNGDDGIIRELLMDFYETSHGRKPAHV
IIFRDGVSESQFNQVLNIELNQICKAFYHLGEKTLPKFTLIVAQKNHHTKLFQDGAPENV
PAGTVVDTKVVHPRHYDFYMCAQAGMIGTSRPTHYHVLIDEIGFSPDDLQKLVHSLSYVY
QRSTTAISTVAPICYAHLAAAQVSQFIKFEEISETSSGHAGVTASGVPPVPELPRLHKNV
ILVLLQRVRCRFADGVYGIWWVASDTFCCLSTSQCRKISWTTVKIGI
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccagaggatggacctcggcgagaaagcttgcccccacctcctccagtcgta
ccaccaaacgcggtgcccacaaaggctgatcaacctaaaattcctgtcatgccggagccc
ccaaaacgacatccaatggtcaggcctggcgttggaaccgatggacggagattaaagttg
ctttccaatcattttgccgtcaagttcagtgctcacgaagctgtgttttatcactacagc
gttactataaagtcagatgataagcgtgctgttgaggggaaagggataggaaggaaggtt
atggacaagctgtatcaaacatacagttctgagcttgcggggaagaatttcgcttatgat
ggtgagaagagcttattcacagttggtgccctccctcataacaacttcgaattcactgta
ctattggaagaatcatctgctagggttgccggaggaagcccagcacacgggagccccagt
gaaggtgacaggaagcgatcaaaacggtcccaccaggcaaaaacgtttaaggttgagata
agctatgctgcaagaatcccaatgaaatctattgcagaagcaatccaaggaagggatgct
gaacatacccaagatgctctaagagtactcgacatcattttaagacaacaacaggcaaaa
aggggttgccttcttgttagacaatctttcttcagtggtgaacatactaactatacaaac
ttgggtggtggagtaactggttgccggggtttccattctagtttttgcaccactaatggt
ggtctctcactgaacatggatgtttccactacgatgattatgactcctggccctgttgtt
aactttctacgtgagaaccagaatgtaagggaaccacatcaaattgactgggcaaaggct
aagagaatgcttaaaaatatgaggatcagaacaacacatagcaatatggaatttaaaatc
atagggatgagtgaactgccatgcaaccagcaactattcccaatgaaagtgagaaatggc
agggaagaagggcggacaattaatgtcacagtatttgattactttagtagggacaagaag
atagagctgacatggtcagcttatgcaccatgtcttgatgtgggcaagccaaagaggccc
aactaccttcctgtcgagctctgcaatcttgtgccattgcaacggtatacaaaggcatta
tcttcccaacaaagagcttccttagttgagaaatcacgacagaaacctcttgaaagaatt
agagtggtgactgatgcagtgagaaacaatcgatatgatgaagaatcaatgctctcttca
tgtggaatatccattgacaagcaactaatacggttggatggccgtgttcttaccgcaccc
acgttaaaagttggcaatgaagaagactgtgtaccacgcaacggaagatggaacttcaac
aacaagactctctgtgagcccaccaacattgagcgctgggctattgtgaacttttctgca
cgttgtgatatgagtcatctgtctcgagagcttataaactgcggaatgagaaaaggaatt
aacatcaaccgtccacacgccttaattgatgaggaccgccgatgtatgaggttacaacca
tttgtaagagttgaaaaggtgtttgaaaaggtgatggcgagcctccctggtcccccacag
tttcttctatgtgttctttccgagaaaaaaaattctgatgtctatggaccctggaagagg
aaaaatcttgctgatatgggaattgttacccagtgtatagctccaactaagatcaatgac
caatatttgacaaatgtacttctgaagatcaattccaagcttggcggtattaactctgta
ttggctgttgagcgctctctacgcataccattagtcactgagattcctactttaattttg
ggaatggatgtgtcacatggctctcctggccgagccgacatcccttcaattgcagcggtg
gttgggtcaaggcaatggccattgatttcaagatacagagcttctgtaagatcacagtca
ccaaaattggaaatgattgactgtctgtataaaccccactcaaatggagatgatggtatt
atcagggaactcttgatggatttctatgaaacgagtcatggaaggaaacctgcacacgta
atcattttcagggatggtgtgagcgagtcacagtttaatcaagttttaaatatagagttg
aaccagatttgtaaggcattttatcatttaggtgaaaaaacgcttccaaaatttacgtta
attgtggcacagaagaaccaccatacgaaattatttcaggatggtgcccctgaaaatgtt
cctgcaggtactgttgtggatacaaaggttgtccaccccagacactatgacttctacatg
tgtgcccaagctggaatgatcggaacctcgaggcccacacattaccacgtactgattgat
gagattggtttctcacctgatgatcttcagaaacttgttcattcactttcctacgtctac
cagaggagcacaactgctatttccactgtcgctcccatctgctacgcacatcttgcagca
gcgcaggtgtcccagttcatcaaattcgaggaaatctcagagacctcttctggacacgca
ggcgtcactgcttctggggttccccctgttcccgagctccctcggctccacaagaatgtg
atattggtacttttgcaaagagttaggtgcaggtttgcagatggggtgtatggaatttgg
tgggtagcatcagatacattttgttgtttaagcacaagtcaatgtcgcaaaatctcgtgg
acgaccgttaaaatcggcatatag
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