KEGG   Asparagus officinalis (garden asparagus): 109841206
Entry
109841206         CDS       T05243                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109841206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aof03041]
    109841206
   03036 Chromosome and associated proteins [BR:aof03036]
    109841206
Spliceosome [BR:aof03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109841206
 Complex B
    109841206
 Complex C
   U2 SnRNP specific factors
    109841206
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    109841206
SSDB
Other DBs
NCBI-GeneID: 109841206
NCBI-ProteinID: XP_020265702
LinkDB
Position
5:complement(126891873..126898203)
AA seq 464 aa
MECEEMKNKGNASHKRPIVVNESVGSDDELSSEKKLKTNSRELVKNLLSRVMNDSSHQKS
VFFINFTRSIHDMGIEPINVLDCTLSWMLTERKSLKDEEAGFLLKVMNKVLPSCDEDKVR
PLVSRIILVAQPFVEDASSHCCIKASEIIYTLSKITGLDEIAVLIRLQMNDSSDYVRDVA
VKVMGIVASALGIHVVFPFIESCCRRIEPLRVRCAAIRMVEQFAVRIGCTLLPHLSPLIE
LMEFGLLHKDLEIMRITALSLAALAKAVAPYGYEHFKPILHRLFDFFSRDGVGFIHRRGK
VLGALVKLFTFIIQLLTYPYPSDINWNVANGVLLVSRLSVDDEEMKEIGLEAIKSLAEIK
DVLLQGFLMGGPRCFVRIMWTRTMMRRDKYVLLADATVALANKLGVAYLKRSISKELDDY
SEDYRQMVLKIIEKLLACPDNSSDRFAQLEDAFQDIAYLFCSSF
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggagtgcgaggagatgaagaacaaagggaatgcgtctcataaacgaccaattgttgtc
aatgaaagtgtaggaagtgatgatgagttgtcgtccgagaagaaattgaagaccaattct
cgagaacttgtcaagaatctactctcaagagtgatgaacgattcctctcatcaaaagtca
gtattttttattaacttcacccgaagtattcatgatatgggcattgagcccatcaatgta
cttgactgcactctctcatggatgctaacagagcgcaaatcactcaaagatgaagaggcc
ggcttcctactgaaagtcatgaacaaggtattgcccagttgcgatgaggacaaagttcga
cctttggtttctcgaattatattagttgcccaaccttttgttgaagatgcctcctctcat
tgttgcatcaaggcgagcgagatcatctacactctcagcaaaatcacgggtctggatgaa
attgctgtgctgattcgtcttcagatgaatgacagtagtgattacgtaagggatgtggcg
gtcaaagttatggggatcgtagcatctgcactcggaattcatgttgttttcccgttcatc
gaaagttgttgtcgaagaattgagccattgcgagtccgttgtgctgctataagaatggtg
gagcagtttgctgtgaggatcggatgcacgttgctgccacatctttcgcctctaattgaa
cttatggagttcggtctccttcacaaggatttagaaatcatgcgaatcacagctttatct
ctcgctgctcttgctaaagcggtggcaccctatggatatgagcactttaaaccgatattg
catcgactcttcgatttcttcagcagagatggagttggttttattcatcgaagagggaaa
gtgttgggagcgctggtgaagctattcactttcattattcaacttctaacgtatccatat
cccagcgacatcaattggaacgtagcgaacggggtattgctcgtgtcgagactttcggta
gacgacgaggagatgaaggagattggattggaagccatcaaaagcctagctgagatcaag
gacgttctgttacagggttttctaatgggcgggcctagatgtttcgtgcgaattatgtgg
acgagaacgatgatgagaagggacaagtacgtgttgttggccgatgcaaccgttgctttg
gccaataagttgggagttgcgtatctcaagagatcaatatctaaagaactcgatgattat
agtgaagattacaggcagatggtgttgaaaataattgaaaagttgttggcgtgtcctgat
aattcatcggatcgttttgctcagttggaagacgcctttcaggatatcgcctacttgttt
tgttcttcgttttag

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