KEGG   Asparagus officinalis (garden asparagus): 109841278
Entry
109841278         CDS       T05243                                 
Name
(RefSeq) uncharacterized protein LOC109841278
  KO
K03873  elongin-B
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109841278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aof04121]
    109841278
   03400 DNA repair and recombination proteins [BR:aof03400]
    109841278
Ubiquitin system [BR:aof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     109841278
   Cul5 complex
     109841278
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109841278
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 Chal_sti_synt_N Ubiquitin_5 UCH_UBL1
Other DBs
NCBI-GeneID: 109841278
NCBI-ProteinID: XP_020265785
LinkDB
Position
5:128396895..128402092
AA seq 96 aa
MAMYIRVKRNKVTYFVQCDPTETTLEIKQKLQGLIDQTSNNQRLTLVSTNEVLDDSKTLA
DQKVENDAIVGLSIRKDDNEFEEVCIARVEDYTPFS
NT seq 291 nt   +upstreamnt  +downstreamnt
atggctatgtatattcgtgtaaagcgcaacaaggtgacctactttgtgcagtgtgatcca
actgaaacaactttagaaattaagcagaagttacagggattaattgatcaaacaagcaat
aatcaacggttaaccttggtatccactaacgaggttttggatgattcgaagacattagca
gatcagaaggttgaaaatgatgctattgtggggttgagcataagaaaagatgataatgag
tttgaggaagtctgcattgctcgtgtagaagattacaccccattctcatga

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