Asparagus officinalis (garden asparagus): 109841310
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Entry
109841310 CDS
T05243
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic isoform X1
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03060
Protein export
aof04141
Protein processing in endoplasmic reticulum
aof04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
109841310
04141 Protein processing in endoplasmic reticulum
109841310
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109841310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109841310
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aof02044
]
109841310
Membrane trafficking [BR:
aof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
109841310
Secretion system [BR:
aof02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
109841310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-GeneID:
109841310
NCBI-ProteinID:
XP_020265828
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Position
5:complement(129015800..129023887)
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AA seq
527 aa
AA seq
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MLLSVRDPLGLSSTLSRNPVTSKGYGHRLCRALLSVEGNPKRGRHSQHVDGSAFDPLGFN
SETSSGLTGAWDSVVGFFSDTFQSTSSTRKEKPSTRGLAASIEDSSIEFGDFFKGPLPGK
FLKLLGYLALSRLGIYIPLGGVNRDAFVGNLDSNSLLSTLDSFSGGGIGRLGICSLGIVP
FINASIVFQLLTQLYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPYV
TDFSTEWALSSVTLLTLGSVFTTYIGERISDLKLGNGTSLLIFTSILSYLPASFGRTVAE
AFQEGNYVGLATIVLSFFLLVLGIVYVQEAERKIPLNYASRYSSRSGGLGKSAYLPFKVN
SSGVMPIIFSTSSLALPGTLARFTGLAALKNAAVALNPGGALYLPTNIMLIAFFNYYYTF
LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVVEQV
THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDINK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgctcttatcagttcgagatcctctcggcctctcttcaaccctctctcggaatcccgtc
acctccaagggatacggtcaccggctgtgccgagctttgctgtcggtcgagggaaatccc
aaaagaggaaggcacagtcaacacgttgatggatctgcttttgatccattgggttttaac
tcagagacgtcttcaggtcttactggtgcttgggatagtgttgtaggattcttttctgat
acatttcaaagtacatcgagcacgagaaaggagaagccttcaacccgagggctcgcagct
tcaatcgaagatagctccattgaatttggcgatttttttaaaggtccgcttccaggaaaa
ttcctgaaactcttaggttacttagcattatccaggcttgggatatacattcctttagga
ggtgtaaaccgagatgcttttgttggtaatttggactcaaacagtctgttgagtacttta
gattcattttctggtggtggcattggtaggcttggaatctgctcgctgggaattgtccct
tttataaatgcatctattgtgttccagctacttactcagctttatcccaagctgcaagat
cttcagaagagagagggggaagcgggaaggaagaagattcttcaatatacacgctatgct
tcagtaggttttgctatagtgcaggctatcgggcaagtgcttttcctccgaccatatgtc
actgatttcagtacagaatgggcactgtcatcagtcacattattaactctcggttcggta
ttcactacttatatcggggaaagaatatctgacctgaaactcggaaacgggacatcgcta
ttgatattcacgagcattctatcatacttgcctgcatcatttggaagaacagttgcagaa
gcttttcaagaagggaactatgtcggacttgctaccatcgtcttgtcattttttctactg
gttcttggcattgtatatgtccaggaagccgagagaaaaataccacttaactatgcatca
agatacagtagtagaagcggggggcttggaaaatctgcataccttcctttcaaggtgaac
agttctggggtgatgcccattatattttcgacatcttcactagctttgcctggtactctg
gcacgcttcactggcttagctgctctaaaaaatgctgcagttgcattgaaccctggaggt
gctttgtacctcccaaccaatataatgctgatcgcattcttcaattactattatactttt
ctacaattggatcctgatgatgtaagtgaacagttgaagcgccaaggtgcttcaattcca
cttgttcgccctgggaagagcactgcagcttttattaaaactgtccttagtaggatatcg
gttcttggttcagccttcttggccgtactggcggcaggtccagcggtggtcgaacaagtt
acacacctcactgcgttccgtggattcgccggaacctctgttctcatccttgtcgggtgc
gccaccgacacggcaagaaaagttcaagctgagatcatttcccaaaaatacaagaacatt
gagttctacgatattaacaagtag
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