Asparagus officinalis (garden asparagus): 109841428
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Entry
109841428 CDS
T05243
Name
(RefSeq) YTH domain-containing family protein 1-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109841428
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109841428
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
RE_AspBHI_N
Motif
Other DBs
NCBI-GeneID:
109841428
NCBI-ProteinID:
XP_020265987
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All DBs
Position
5:4013219..4018259
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AA seq
692 aa
AA seq
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MEMYNGSDNGPTETYMMPGTVPNPQLTLFQPLEGVDYITNEVAPEVTYEQGLYYPATNYY
GYYSTGLEPQREWVDQQRFFGLDGQELHYAVLQTESSPYVYYSPSYGYAQPSYNPYNPYS
PCAAIGLDGSNIGTQPQPYFSDPSYQLPISSPAAYIPVILQPHSDAAPNISMTPTVLGSI
SSSRQVTANSKSKSCASSNGGATSQGTASRILKSELSGSSTPGQGRTPGLTQVTDSHGSV
SSVQNPSKVPSVNFPQNFGSTVHGWTTVDRLRPRFQFNAAVKNGSGNSDFLGEQNRGPRT
NRLKGQPASASTIGLSISKAGGNNAQEAIIIRADQYNKDDFPLDHPDAKFFVIKSYSEDD
VHKSIKYNVWSSTPNGNKRLNSAYEDAQRISTGKVKNCPIFLFFSVNASGQFCGVAEMTG
PVDFDNDMDFWQQDKWTGSFPVKWHIIKDAPNTSFRQILLENNENKPVTNSRDTQEIMYA
PGMSMLNIFKDSPLSTSILDDFMFYEERQKIMQEEKSRFTGRSYKTYIPAIVSAEKSSDS
AGQSGSSDQIAKGDGGQASVTSGQPLNADVELTEFKHNKSSGSDGPIELDALESLNAVKD
LNPDKKEDANYLSSVMKMKSLPLCGKEDETEAIMKEKSTQSDVVTVGSMHIKVNGTAEAA
SEVTNIGSTIESKTMKLDDNKGPISEDSASLK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtataatggttcggataatggacctacagaaacttacatgatgcctggcact
gttccgaacccccaactaacattatttcaacctttggaaggggttgattatatcactaat
gaagttgctcctgaggttacttatgaacaaggactatactaccctgctaccaactattat
gggtactatagtacaggtcttgagccgcaacgtgaatgggttgaccagcagagatttttt
ggtttagatggtcaagagcttcattatgcagttctgcaaactgaaagctctccatatgta
tattattcacctagctatggatatgcacagccatcttataatccttacaatccttactca
ccttgtgctgccattggtcttgatggatcaaatataggaacacaaccacaaccatatttc
tctgatccttcatatcagctaccaatctcatcacctgctgcttacattccggtaatcctc
cagcctcattcagatgctgccccaaatatctctatgacccctacagttttgggctctatt
tcatcgagtagacaagtcactgccaattcaaagtcaaaatcatgtgcatcttcaaatggg
ggagccacttctcaaggcactgcttcgaggatcctaaaatctgagttgtcgggatcttca
acaccgggacagggaaggactcctggtttgacacaagtgacagattcccatggtagtgtt
tcatcggttcaaaatccatcaaaagtcccatcggtcaacttcccccaaaactttggatcc
actgttcatggctggacaacagttgacaggttaaggccaaggttccaatttaatgcagca
gtgaagaatgggagtggaaactcagactttctgggtgagcaaaatagagggcctcgaaca
aacagattaaaaggccaaccagcatctgcaagtactattggactttcaataagcaaagct
ggcggtaataatgctcaggaagccattattattagagccgatcaatacaataaggatgac
ttccctcttgaccatccagatgccaagtttttcgttataaaatcgtacagtgaggatgat
gtgcataaaagtatcaaatataatgtgtggtcaagcacccctaacggcaacaagaggtta
aacagtgcatatgaggatgcacaaagaatatctaccggaaaagtcaagaactgccccatt
tttctgttcttttctgttaacgcaagtgggcaattctgtggtgttgctgaaatgactggc
cctgttgattttgacaatgatatggatttctggcagcaagacaaatggactggtagcttt
cctgttaaatggcacataataaaggatgctccaaacactagctttcggcagatcctatta
gagaataatgaaaataaacctgtaactaatagcagagacacccaagagataatgtatgca
ccgggcatgagtatgctaaacatcttcaaggatagccccctgagcacatcgatccttgat
gattttatgttttatgaagagcggcagaagattatgcaggaagagaagtctagatttaca
ggaagaagctacaaaacttacattcctgcaattgtttctgccgagaagtccagtgattca
gctgggcagagtggttcctctgatcagattgcaaaaggggacggaggtcaagcgagtgta
acatctggtcaacctctgaatgctgatgtcgagctaaccgagtttaaacataataagagt
tcaggtagtgatggcccaattgaacttgatgcccttgagtcattaaatgctgtgaaagat
cttaatcctgataaaaaggaggatgccaactatttgagttctgttatgaaaatgaagtca
ctaccgctctgtggtaaagaagatgaaacagaggccattatgaaagaaaaaagtactcaa
agtgatgtcgtcactgttggttcaatgcacatcaaggtaaatggaactgctgaggctgcc
tctgaggttacaaatataggatctactattgaatccaagacaatgaagcttgatgataac
aaaggtcctatatctgaggacagtgcatcgctgaaatga
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